Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC006254.3-201ENST00000603353 884 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL445435.1-201ENST00000604232 665 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL161756.2-201ENST00000604597 246 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AC073387.2-201ENST00000604797 784 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL009028.1-201ENST00000604895 802 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 HMGN2P28-201ENST00000606102 262 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AC026790.2-201ENST00000606282 430 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AC023510.2-201ENST00000622162 746 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 AC098679.5-201ENST00000624394 571 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AP003485.1-201ENST00000625093 753 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 OR4G3P-201ENST00000633500 913 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.29□□□□□ -1.88
EFNA3P52797 CEP170P1-201ENST00000502249 4587 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
EFNA3P52797 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
EFNA3P52797 AC106754.1-201ENST00000562632 1513 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 AL021368.2-201ENST00000606125 5352 ntBASIC3.29□□□□□ -1.88
EFNA3P52797 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.28□□□□□ -1.88
EFNA3P52797 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 AP001148.1-201ENST00000624124 2359 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 RNA5SP72-201ENST00000364442 117 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 RNA5SP167-201ENST00000365461 116 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 RNU6-356P-201ENST00000384140 107 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 HSFY4P-201ENST00000415994 1181 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC106883.1-201ENST00000418805 562 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC027644.1-201ENST00000419595 298 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AL049610.1-201ENST00000423374 372 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC114973.1-201ENST00000429057 632 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.28□□□□□ -1.88
EFNA3P52797 SKP1P1-201ENST00000438081 489 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 COX6CP18-201ENST00000448769 222 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 HMGB3P8-201ENST00000449709 577 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 NPM1P13-201ENST00000452663 865 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC074250.1-201ENST00000511117 192 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.28□□□□□ -1.88
EFNA3P52797 NDUFS5P6-201ENST00000529136 295 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.28□□□□□ -1.88
EFNA3P52797 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.28□□□□□ -1.88
EFNA3P52797 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.28□□□□□ -1.88
EFNA3P52797 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.28□□□□□ -1.88
EFNA3P52797 AL022067.1-201ENST00000602426 454 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AL606834.3-201ENST00000602615 496 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC096947.1-201ENST00000603233 470 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC069431.2-201ENST00000604149 1099 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 ELOCP35-201ENST00000604289 336 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC027449.1-201ENST00000608890 407 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 AC096577.2-201ENST00000611455 153 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 AC105227.2-201ENST00000615075 605 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.28□□□□□ -1.88
EFNA3P52797 OR6C71P-202ENST00000641886 1107 ntBASIC3.28□□□□□ -1.88
EFNA3P52797 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
EFNA3P52797 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
EFNA3P52797 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.28□□□□□ -1.89
EFNA3P52797 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
EFNA3P52797 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
EFNA3P52797 AL645937.1-201ENST00000641739 1652 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 AC025125.1-201ENST00000624743 1922 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
EFNA3P52797 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
EFNA3P52797 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
EFNA3P52797 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.27□□□□□ -1.89
EFNA3P52797 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
EFNA3P52797 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
EFNA3P52797 RNU6-582P-201ENST00000362989 107 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 RNU5E-10P-201ENST00000363506 118 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 RNU6-374P-201ENST00000364146 108 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
EFNA3P52797 RNU6-921P-201ENST00000384361 107 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 Y_RNA.578-201ENST00000390903 88 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 SSXP10-201ENST00000402595 565 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 AL355379.1-201ENST00000405542 640 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 AL139098.1-201ENST00000407291 389 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 RNU6-584P-201ENST00000410350 95 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 BX323014.1-201ENST00000412876 237 ntBASIC3.27□□□□□ -1.89
EFNA3P52797 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms