Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3□□□□□ -1.93
CX3CR1P49238 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3□□□□□ -1.93
CX3CR1P49238 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
CX3CR1P49238 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3□□□□□ -1.93
CX3CR1P49238 AC006557.5-201ENST00000603126 811 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AC026741.1-201ENST00000605892 482 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AC006329.2-201ENST00000611491 394 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL390240.1-201ENST00000612950 384 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL121772.2-201ENST00000614331 297 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL136164.4-201ENST00000625013 2135 ntBASIC3□□□□□ -1.93
CX3CR1P49238 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3□□□□□ -1.93
CX3CR1P49238 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
CX3CR1P49238 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
CX3CR1P49238 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 ZNF285B-201ENST00000561698 1767 ntBASIC3□□□□□ -1.93
CX3CR1P49238 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 AL645937.1-201ENST00000641739 1652 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.99□□□□□ -1.93
CX3CR1P49238 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CR1P49238 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CX3CR1P49238 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CX3CR1P49238 AL591034.1-201ENST00000407447 340 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AL023807.1-201ENST00000407932 359 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 RNU6ATAC-201ENST00000408749 126 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CR1P49238 AL356968.1-201ENST00000416622 474 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CR1P49238 MTCO2P1-201ENST00000424648 477 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 DEFB130D-201ENST00000426866 237 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 RPL31P54-201ENST00000429803 370 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CX3CR1P49238 HIGD1AP11-201ENST00000438361 280 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CR1P49238 OR51B8P-201ENST00000449892 769 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 PABPC1P3-201ENST00000469174 459 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC078857.1-201ENST00000469870 667 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC108078.3-201ENST00000502633 489 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 SNORA64.4-201ENST00000516632 81 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC019227.1-201ENST00000526902 510 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AP003049.1-201ENST00000529418 457 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC126177.3-201ENST00000551839 688 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CR1P49238 AL163153.1-201ENST00000554223 283 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.99□□□□□ -1.93
CX3CR1P49238 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CR1P49238 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.99□□□□□ -1.93
CX3CR1P49238 AC037471.2-201ENST00000564941 598 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC2.99□□□□□ -1.93
CX3CR1P49238 MIR4789-201ENST00000577469 82 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 GAS5-AS1-201ENST00000602767 694 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC119501.1-201ENST00000603646 475 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC018755.4-201ENST00000619715 454 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AC040168.1-201ENST00000623594 991 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 AL121594.5-201ENST00000631724 573 ntBASIC2.99□□□□□ -1.93
CX3CR1P49238 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC2.99□□□□□ -1.93
CX3CR1P49238 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CX3CR1P49238 AC002546.1-201ENST00000588041 2504 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 AC005183.1-201ENST00000603687 1979 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CX3CR1P49238 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CX3CR1P49238 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CX3CR1P49238 RNU6-115P-201ENST00000364310 107 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CR1P49238 SNORA5A-201ENST00000384111 134 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 RNU6-932P-201ENST00000391108 106 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CR1P49238 CYCSP4-201ENST00000429682 331 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CR1P49238 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CR1P49238 HMGN2P20-201ENST00000437531 273 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CR1P49238 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CR1P49238 RPL17P49-201ENST00000443728 411 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC104308.1-201ENST00000454621 333 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 TRBV26-201ENST00000456572 344 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CR1P49238 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CX3CR1P49238 TAF8-207ENST00000482432 556 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CR1P49238 AC114967.1-201ENST00000504890 259 ntBASIC2.98□□□□□ -1.93
CX3CR1P49238 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms