Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TMSB4XP6-201ENST00000415187 135 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 TMSB4XP1-201ENST00000424567 135 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD4P46934 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 NPM1P13-201ENST00000452663 865 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 NAP1L1P3-201ENST00000462291 880 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 PRDX3P4-201ENST00000470828 747 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD4P46934 RN7SL442P-201ENST00000473804 320 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.84□□□□□ -1.79
NEDD4P46934 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 MTND2P32-201ENST00000521584 1038 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 MTCO3P15-201ENST00000526563 574 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.84□□□□□ -1.79
NEDD4P46934 HIGD1AP1-201ENST00000550979 275 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD4P46934 MTCO2P2-201ENST00000591258 225 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD4P46934 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD4P46934 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.84□□□□□ -1.79
NEDD4P46934 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 AC004825.2-201ENST00000616634 455 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NEDD4P46934 AL109659.3-201ENST00000624985 950 ntBASIC3.84□□□□□ -1.79
NEDD4P46934 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.84□□□□□ -1.8
NEDD4P46934 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC011155.1-201ENST00000316512 456 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 RNA5SP387-201ENST00000364226 106 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD4P46934 HNRNPDP2-201ENST00000406475 478 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 RNU6-272P-201ENST00000411028 104 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 ELOCP11-201ENST00000436690 332 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 RPL23AP22-201ENST00000437556 453 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 HMGB3P11-201ENST00000440127 604 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC004865.1-201ENST00000442276 1003 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 ELOCP16-201ENST00000444494 332 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 HMGB3P6-201ENST00000444896 598 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC096992.1-201ENST00000459808 709 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 RPS27P23-201ENST00000487608 251 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.83□□□□□ -1.8
NEDD4P46934 AL160237.3-201ENST00000604114 1013 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.83□□□□□ -1.8
NEDD4P46934 AC034229.4-201ENST00000607861 441 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 OR1S1-201ENST00000624470 978 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 MTND5P1-201ENST00000445440 1375 ntBASIC3.83□□□□□ -1.8
NEDD4P46934 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
NEDD4P46934 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NEDD4P46934 AC007529.1-201ENST00000418574 2178 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD4P46934 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD4P46934 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD4P46934 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEDD4P46934 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEDD4P46934 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.82□□□□□ -1.8
NEDD4P46934 OR1L1-202ENST00000373686 1083 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NEDD4P46934 MIR23A-201ENST00000385245 73 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 SKINT1L-201ENST00000401057 817 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.82□□□□□ -1.8
NEDD4P46934 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD4P46934 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD4P46934 AC069528.1-202ENST00000482888 637 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 RPL30P11-201ENST00000495304 339 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AC010460.2-201ENST00000509054 677 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.82□□□□□ -1.8
NEDD4P46934 RPL7L1P13-201ENST00000511702 739 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 PHBP14-201ENST00000512887 367 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.82□□□□□ -1.8
NEDD4P46934 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NEDD4P46934 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.82□□□□□ -1.8
NEDD4P46934 RFPL1S-203ENST00000539579 330 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 OR4U1P-201ENST00000554958 912 ntBASIC3.82□□□□□ -1.8
NEDD4P46934 SERPINE4P-201ENST00000554978 281 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms