Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 ZYXP1-201ENST00000617638 118 ntBASIC4.09□□□□□ -1.75
HADHAP40939 AC011330.2-201ENST00000621680 635 ntBASIC4.09□□□□□ -1.75
HADHAP40939 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HADHAP40939 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HADHAP40939 IPO8P1-201ENST00000455509 3109 ntBASIC4.09□□□□□ -1.75
HADHAP40939 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
HADHAP40939 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
HADHAP40939 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
HADHAP40939 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.76
HADHAP40939 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HADHAP40939 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
HADHAP40939 AL121657.1-201ENST00000327215 531 ntBASIC4.08□□□□□ -1.76
HADHAP40939 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HADHAP40939 RNU6-989P-201ENST00000362756 107 ntBASIC4.08□□□□□ -1.76
HADHAP40939 SNORD35B-201ENST00000363660 87 ntBASIC4.08□□□□□ -1.76
HADHAP40939 RNA5SP479-201ENST00000364858 117 ntBASIC4.08□□□□□ -1.76
HADHAP40939 RN7SKP56-201ENST00000410513 331 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AL513174.1-201ENST00000423182 629 ntBASIC4.08□□□□□ -1.76
HADHAP40939 HMGB3P5-201ENST00000428894 612 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC087650.1-201ENST00000431445 468 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.08□□□□□ -1.76
HADHAP40939 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HADHAP40939 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.08□□□□□ -1.76
HADHAP40939 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.08□□□□□ -1.76
HADHAP40939 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.08□□□□□ -1.76
HADHAP40939 AL365440.1-201ENST00000436135 2167 ntBASIC4.08□□□□□ -1.76
HADHAP40939 MTCO2P20-201ENST00000437339 673 ntBASIC4.08□□□□□ -1.76
HADHAP40939 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HADHAP40939 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HADHAP40939 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.08□□□□□ -1.76
HADHAP40939 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 FABP3P2-201ENST00000453169 399 ntBASIC4.08□□□□□ -1.76
HADHAP40939 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AC097493.1-201ENST00000463958 372 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC069499.1-201ENST00000489433 509 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC104090.1-201ENST00000506341 1171 ntBASIC4.08□□□□□ -1.76
HADHAP40939 RN7SKP287-201ENST00000516546 266 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC105185.1-201ENST00000518705 535 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.08□□□□□ -1.76
HADHAP40939 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.08□□□□□ -1.76
HADHAP40939 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AC009097.3-201ENST00000563557 1018 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AL360157.1-201ENST00000565962 87 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.08□□□□□ -1.76
HADHAP40939 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.08□□□□□ -1.76
HADHAP40939 AC093227.2-201ENST00000589357 285 ntBASIC4.08□□□□□ -1.76
HADHAP40939 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HADHAP40939 DDX43P2-201ENST00000604753 1354 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC114878.2-201ENST00000604863 1251 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC010738.1-201ENST00000604970 987 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC006270.3-201ENST00000605967 1036 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC063944.3-201ENST00000609969 533 ntBASIC4.08□□□□□ -1.76
HADHAP40939 TUSC7.1-201ENST00000610969 165 ntBASIC4.08□□□□□ -1.76
HADHAP40939 AC231657.1-201ENST00000624313 397 ntBASIC4.08□□□□□ -1.76
HADHAP40939 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.08□□□□□ -1.76
HADHAP40939 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 AC244517.1-201ENST00000606030 2086 ntBASIC4.07□□□□□ -1.76
HADHAP40939 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.07□□□□□ -1.76
HADHAP40939 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 OR4G11P-202ENST00000642116 1414 ntBASIC4.07□□□□□ -1.76
HADHAP40939 MTND4P34-201ENST00000572715 1371 ntBASIC4.07□□□□□ -1.76
HADHAP40939 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 SNORD51-201ENST00000384320 80 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC119751.3-201ENST00000399720 670 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AL583834.1-201ENST00000406943 343 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AMD1P2-201ENST00000412936 992 ntBASIC4.07□□□□□ -1.76
HADHAP40939 GLRXP1-201ENST00000423261 334 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AL358472.1-201ENST00000431295 329 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 FGF7P5-201ENST00000441829 291 ntBASIC4.07□□□□□ -1.76
HADHAP40939 RPS4XP4-201ENST00000443195 763 ntBASIC4.07□□□□□ -1.76
HADHAP40939 HSFY6P-201ENST00000445573 403 ntBASIC4.07□□□□□ -1.76
HADHAP40939 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.07□□□□□ -1.76
HADHAP40939 AL445669.2-201ENST00000454425 421 ntBASIC4.07□□□□□ -1.76
HADHAP40939 ANP32BP2-201ENST00000454525 545 ntBASIC4.07□□□□□ -1.76
HADHAP40939 VN1R40P-201ENST00000455196 941 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.07□□□□□ -1.76
HADHAP40939 AC106872.2-201ENST00000494303 480 ntBASIC4.07□□□□□ -1.76
HADHAP40939 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HADHAP40939 AP004371.1-201ENST00000525240 214 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.07□□□□□ -1.76
HADHAP40939 DUXAP1-201ENST00000556632 463 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.07□□□□□ -1.76
HADHAP40939 AC022968.1-201ENST00000567372 442 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AC053481.3-201ENST00000577881 843 ntBASIC4.07□□□□□ -1.76
HADHAP40939 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.07□□□□□ -1.76
HADHAP40939 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms