Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC027807.1-201ENST00000559921 996 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC093519.1-201ENST00000566109 298 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC138915.2-201ENST00000569776 97 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 ZNF415P1-201ENST00000582279 1166 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 MIR5195-201ENST00000583555 115 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC128687.2-201ENST00000609657 566 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AL136981.2-201ENST00000617319 734 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC007494.3-201ENST00000624660 743 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC021755.1-201ENST00000559747 1447 ntBASIC4.82□□□□□ -1.64
COL15A1P39059 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.82□□□□□ -1.64
COL15A1P39059 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
COL15A1P39059 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
COL15A1P39059 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
COL15A1P39059 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 AC090971.4-201ENST00000560291 1800 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL15A1P39059 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL15A1P39059 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 AL021407.1-201ENST00000404531 386 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 BOLA3P4-201ENST00000418151 400 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 VN1R108P-201ENST00000431580 830 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 ELOCP18-201ENST00000434209 337 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.81□□□□□ -1.64
COL15A1P39059 RPL21P23-201ENST00000446654 460 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC073387.1-201ENST00000453261 709 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC084198.1-201ENST00000477747 402 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 NCOR1P1-202ENST00000486162 291 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 RNA5SP154-201ENST00000516193 111 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 RN7SKP31-201ENST00000516354 278 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
COL15A1P39059 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 SERPINE4P-201ENST00000554978 281 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC006960.3-201ENST00000561845 705 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 AC006270.3-201ENST00000605967 1036 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AL354760.1-201ENST00000608357 643 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AC011939.3-201ENST00000613686 466 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 AC243312.2-201ENST00000623340 601 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 IPO8P1-201ENST00000455509 3109 ntBASIC4.81□□□□□ -1.64
COL15A1P39059 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL15A1P39059 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
COL15A1P39059 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
COL15A1P39059 AL356274.2-201ENST00000624379 3752 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC016716.1-201ENST00000265882 708 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 RNU6-115P-201ENST00000364310 107 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.8□□□□□ -1.64
COL15A1P39059 MIR490-201ENST00000384865 128 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 MIR218-2-201ENST00000385006 110 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 RN7SKP177-201ENST00000410567 355 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 AL136133.1-201ENST00000413694 376 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 ATP5HP2-201ENST00000433885 485 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 RPS25P9-201ENST00000435591 252 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 THAP5P1-201ENST00000439089 262 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 RAB11AP1-201ENST00000442978 646 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC009961.3-201ENST00000449832 765 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC097262.1-201ENST00000452559 548 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC008155.2-201ENST00000464337 397 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.8□□□□□ -1.64
COL15A1P39059 AC092045.1-201ENST00000495716 1231 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC147055.4-201ENST00000504399 745 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 AC093281.2-201ENST00000510153 597 ntBASIC4.8□□□□□ -1.64
COL15A1P39059 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms