Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCN4AP35499 RNU6-618P-201ENST00000363518 112 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 ATF1P1-201ENST00000406040 927 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 RNA5SP107-201ENST00000411358 122 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN4AP35499 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SCN4AP35499 HMGB3P12-201ENST00000438745 556 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN4AP35499 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN4AP35499 AC108210.2-201ENST00000503681 201 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 RNU6-491P-201ENST00000516099 110 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 RNU6-751P-201ENST00000516382 101 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC090819.1-201ENST00000523800 1111 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC245128.3-201ENST00000594721 748 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN4AP35499 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.29□□□□□ -1.88
SCN4AP35499 AL136964.1-201ENST00000622038 2990 ntBASIC3.29□□□□□ -1.88
SCN4AP35499 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.29□□□□□ -1.88
SCN4AP35499 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCN4AP35499 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.29□□□□□ -1.88
SCN4AP35499 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCN4AP35499 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SCN4AP35499 MIR512-1-201ENST00000384913 84 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SCN4AP35499 AL356057.3-201ENST00000402607 340 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 RFESDP1-201ENST00000422350 461 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 MTCO1P52-201ENST00000433928 531 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN4AP35499 AC078785.3-201ENST00000476607 425 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AC067805.1-201ENST00000559344 470 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AC103798.2-201ENST00000624292 632 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 MTND5P24-201ENST00000438892 1767 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN4AP35499 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
SCN4AP35499 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.28□□□□□ -1.88
SCN4AP35499 OR51A3P-201ENST00000413596 924 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN4AP35499 AL356320.1-201ENST00000429616 163 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AC105402.2-201ENST00000438503 358 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.28□□□□□ -1.88
SCN4AP35499 SRIP1-201ENST00000489235 288 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 AC006445.2-201ENST00000510061 472 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 UBTFL10-201ENST00000528532 562 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SCN4AP35499 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
SCN4AP35499 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.28□□□□□ -1.88
SCN4AP35499 AL159169.2-201ENST00000610061 1269 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 LRRC77P-213ENST00000637727 880 ntBASIC3.28□□□□□ -1.88
SCN4AP35499 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SCN4AP35499 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SCN4AP35499 AC007336.1-201ENST00000576365 3828 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCN4AP35499 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN4AP35499 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN4AP35499 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.27□□□□□ -1.89
SCN4AP35499 RNU6-482P-201ENST00000391068 107 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN4AP35499 AL591806.2-201ENST00000433122 173 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN4AP35499 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN4AP35499 AC034244.2-201ENST00000514668 858 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.27□□□□□ -1.89
SCN4AP35499 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.27□□□□□ -1.89
SCN4AP35499 AC019227.1-201ENST00000526902 510 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN4AP35499 GMCL1P2-201ENST00000605230 823 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 AC016911.1-201ENST00000613297 452 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 AC093831.2-201ENST00000624393 3427 ntBASIC3.27□□□□□ -1.89
SCN4AP35499 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.27□□□□□ -1.89
SCN4AP35499 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SCN4AP35499 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN4AP35499 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.26□□□□□ -1.89
SCN4AP35499 SNORA36C-201ENST00000384289 132 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN4AP35499 AC093084.1-201ENST00000424233 687 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 MTND4LP13-201ENST00000425022 298 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.26□□□□□ -1.89
SCN4AP35499 RPL7P12-201ENST00000446719 750 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.26□□□□□ -1.89
SCN4AP35499 BUD31P2-201ENST00000449374 300 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 ST13P14-201ENST00000474095 734 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AC098583.1-201ENST00000480875 255 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 NDUFB4P9-201ENST00000511646 388 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN4AP35499 AC009032.1-201ENST00000617574 431 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AL356490.1-201ENST00000623079 479 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 MTND5P19-201ENST00000424872 1794 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN4AP35499 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.26□□□□□ -1.89
SCN4AP35499 AL606537.1-201ENST00000607258 2011 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 TAB3P1-202ENST00000452645 1634 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN4AP35499 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SCN4AP35499 RNA5SP239-201ENST00000410218 129 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 HMGB3P6-201ENST00000444896 598 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 PCNAP1-201ENST00000505363 709 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 RNA5SP320-201ENST00000516263 124 ntBASIC3.26□□□□□ -1.89
SCN4AP35499 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms