Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 DSTNP4-201ENST00000399472 474 ntBASIC3.27□□□□□ -1.89
RORAP35398 RNU6-272P-201ENST00000411028 104 ntBASIC3.27□□□□□ -1.89
RORAP35398 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.27□□□□□ -1.89
RORAP35398 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.27□□□□□ -1.89
RORAP35398 HMGB3P23-201ENST00000414981 585 ntBASIC3.27□□□□□ -1.89
RORAP35398 TOMM22P1-201ENST00000418578 312 ntBASIC3.27□□□□□ -1.89
RORAP35398 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
RORAP35398 AL591503.2-201ENST00000442314 1005 ntBASIC3.27□□□□□ -1.89
RORAP35398 BX248409.1-201ENST00000455497 255 ntBASIC3.27□□□□□ -1.89
RORAP35398 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 RN7SL807P-201ENST00000470923 297 ntBASIC3.27□□□□□ -1.89
RORAP35398 AC087312.1-201ENST00000471411 480 ntBASIC3.27□□□□□ -1.89
RORAP35398 RPS3AP50-201ENST00000487064 803 ntBASIC3.27□□□□□ -1.89
RORAP35398 AL024509.2-201ENST00000493462 493 ntBASIC3.27□□□□□ -1.89
RORAP35398 OR5H3P-201ENST00000502817 919 ntBASIC3.27□□□□□ -1.89
RORAP35398 DSTNP2-201ENST00000504533 515 ntBASIC3.27□□□□□ -1.89
RORAP35398 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 AC027338.1-201ENST00000514840 825 ntBASIC3.27□□□□□ -1.89
RORAP35398 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 RNU1-61P-201ENST00000516107 151 ntBASIC3.27□□□□□ -1.89
RORAP35398 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 AC026333.2-201ENST00000542164 106 ntBASIC3.27□□□□□ -1.89
RORAP35398 DUXAP6-201ENST00000553858 601 ntBASIC3.27□□□□□ -1.89
RORAP35398 EIF5A2P1-201ENST00000564027 460 ntBASIC3.27□□□□□ -1.89
RORAP35398 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.27□□□□□ -1.89
RORAP35398 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.27□□□□□ -1.89
RORAP35398 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 MIR3651-201ENST00000630427 90 ntBASIC3.27□□□□□ -1.89
RORAP35398 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.27□□□□□ -1.89
RORAP35398 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.27□□□□□ -1.89
RORAP35398 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.27□□□□□ -1.89
RORAP35398 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 AC093908.1-201ENST00000623125 8092 ntBASIC3.27□□□□□ -1.89
RORAP35398 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
RORAP35398 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RORAP35398 AC068647.1-201ENST00000489539 2265 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC004925.1-201ENST00000624256 2706 ntBASIC3.26□□□□□ -1.89
RORAP35398 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RORAP35398 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
RORAP35398 RNU6-805P-201ENST00000365643 106 ntBASIC3.26□□□□□ -1.89
RORAP35398 MIR525-201ENST00000384978 85 ntBASIC3.26□□□□□ -1.89
RORAP35398 RSL24D1P1-201ENST00000404972 493 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC073264.1-201ENST00000411508 416 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.26□□□□□ -1.89
RORAP35398 OR1AA1P-201ENST00000419597 916 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.26□□□□□ -1.89
RORAP35398 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 RPL21P13-201ENST00000488305 481 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC026427.2-201ENST00000506228 536 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.26□□□□□ -1.89
RORAP35398 AC121161.1-201ENST00000510606 652 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.26□□□□□ -1.89
RORAP35398 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.26□□□□□ -1.89
RORAP35398 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.26□□□□□ -1.89
RORAP35398 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.26□□□□□ -1.89
RORAP35398 OR4G1P-201ENST00000588632 938 ntBASIC3.26□□□□□ -1.89
RORAP35398 VN1R88P-201ENST00000596787 292 ntBASIC3.26□□□□□ -1.89
RORAP35398 BNIP3P38-201ENST00000601117 544 ntBASIC3.26□□□□□ -1.89
RORAP35398 AL109653.1-201ENST00000603091 248 ntBASIC3.26□□□□□ -1.89
RORAP35398 BNIP3P4-201ENST00000604946 565 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.26□□□□□ -1.89
RORAP35398 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.26□□□□□ -1.89
RORAP35398 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.26□□□□□ -1.89
RORAP35398 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.26□□□□□ -1.89
RORAP35398 MTND5P27-201ENST00000428871 1720 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC073073.2-201ENST00000609827 2578 ntBASIC3.26□□□□□ -1.89
RORAP35398 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
RORAP35398 MTCO1P6-201ENST00000481192 1384 ntBASIC3.25□□□□□ -1.89
RORAP35398 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.25□□□□□ -1.89
RORAP35398 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
RORAP35398 BX323014.1-201ENST00000412876 237 ntBASIC3.25□□□□□ -1.89
RORAP35398 PAICSP7-201ENST00000419829 962 ntBASIC3.25□□□□□ -1.89
RORAP35398 RPF2P1-201ENST00000424137 906 ntBASIC3.25□□□□□ -1.89
RORAP35398 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.25□□□□□ -1.89
RORAP35398 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.25□□□□□ -1.89
RORAP35398 RPL36P19-201ENST00000430744 301 ntBASIC3.25□□□□□ -1.89
RORAP35398 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.25□□□□□ -1.89
RORAP35398 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.25□□□□□ -1.89
RORAP35398 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RORAP35398 PCBP2P3-201ENST00000509726 843 ntBASIC3.25□□□□□ -1.89
RORAP35398 FCF1P8-201ENST00000510322 597 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.25□□□□□ -1.89
RORAP35398 AC010265.1-201ENST00000513509 211 ntBASIC3.25□□□□□ -1.89
RORAP35398 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.25□□□□□ -1.89
RORAP35398 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.25□□□□□ -1.89
RORAP35398 RNU6-202P-201ENST00000515998 96 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms