Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MTND4P13-201ENST00000402078 1023 ntBASIC2.04□□□□□ -2.08
CKS2P33552 RNU4-47P-201ENST00000410876 114 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AL353678.1-201ENST00000422735 741 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS2P33552 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC2.04□□□□□ -2.08
CKS2P33552 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKS2P33552 AL445584.1-201ENST00000431451 330 ntBASIC2.04□□□□□ -2.08
CKS2P33552 MTCO1P45-201ENST00000431457 267 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AL513043.1-201ENST00000439124 535 ntBASIC2.04□□□□□ -2.08
CKS2P33552 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS2P33552 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS2P33552 CYCSP35-201ENST00000451978 304 ntBASIC2.04□□□□□ -2.08
CKS2P33552 RPL27AP5-201ENST00000469428 449 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC003982.1-202ENST00000469928 248 ntBASIC2.04□□□□□ -2.08
CKS2P33552 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS2P33552 RN7SL293P-201ENST00000481765 281 ntBASIC2.04□□□□□ -2.08
CKS2P33552 SRIP1-201ENST00000489235 288 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AIG1P1-201ENST00000503376 148 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS2P33552 AC067904.2-201ENST00000517322 1283 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC019227.1-201ENST00000526902 510 ntBASIC2.04□□□□□ -2.08
CKS2P33552 OSBPL9P3-201ENST00000534523 595 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS2P33552 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS2P33552 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.04□□□□□ -2.08
CKS2P33552 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.04□□□□□ -2.08
CKS2P33552 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.04□□□□□ -2.08
CKS2P33552 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.04□□□□□ -2.08
CKS2P33552 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS2P33552 AC138761.3-201ENST00000579993 334 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC006130.2-201ENST00000586202 326 ntBASIC2.04□□□□□ -2.08
CKS2P33552 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.04□□□□□ -2.08
CKS2P33552 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKS2P33552 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CKS2P33552 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CKS2P33552 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 SAGE4P-201ENST00000442271 3381 ntBASIC2.03□□□□□ -2.08
CKS2P33552 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CKS2P33552 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CKS2P33552 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CKS2P33552 SNORD56.5-201ENST00000364281 72 ntBASIC2.03□□□□□ -2.08
CKS2P33552 RNU6-31P-201ENST00000384388 108 ntBASIC2.03□□□□□ -2.08
CKS2P33552 RPL7P8-201ENST00000411964 730 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 AC073310.1-201ENST00000423226 1033 ntBASIC2.03□□□□□ -2.08
CKS2P33552 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CKS2P33552 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 TPTE2P6-202ENST00000445572 1007 ntBASIC2.03□□□□□ -2.08
CKS2P33552 RPL6P5-201ENST00000445678 828 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 AC034236.1-201ENST00000469891 373 ntBASIC2.03□□□□□ -2.08
CKS2P33552 GAPDHP39-201ENST00000481866 979 ntBASIC2.03□□□□□ -2.08
CKS2P33552 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.03□□□□□ -2.08
CKS2P33552 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 SCARNA13-201ENST00000516672 275 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AC104115.2-201ENST00000523026 687 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AC022690.1-201ENST00000526681 550 ntBASIC2.03□□□□□ -2.08
CKS2P33552 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.03□□□□□ -2.08
CKS2P33552 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 DNAJC8P1-201ENST00000554535 372 ntBASIC2.03□□□□□ -2.08
CKS2P33552 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CKS2P33552 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 AC007566.2-201ENST00000603642 413 ntBASIC2.03□□□□□ -2.08
CKS2P33552 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.03□□□□□ -2.08
CKS2P33552 VIS1.1-201ENST00000610517 203 ntBASIC2.03□□□□□ -2.08
CKS2P33552 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CKS2P33552 AL162574.2-201ENST00000614618 657 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.03□□□□□ -2.08
CKS2P33552 SNHG22-203ENST00000617833 660 ntBASIC2.03□□□□□ -2.08
CKS2P33552 U73479.1-201ENST00000618062 168 ntBASIC2.03□□□□□ -2.08
CKS2P33552 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AP003122.6-201ENST00000623831 495 ntBASIC2.03□□□□□ -2.08
CKS2P33552 AC091564.4-201ENST00000533934 2194 ntBASIC2.03□□□□□ -2.08
CKS2P33552 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.03□□□□□ -2.08
CKS2P33552 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.03□□□□□ -2.09
CKS2P33552 AC087565.3-202ENST00000642085 1603 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AC024341.1-201ENST00000526444 1552 ntBASIC2.02□□□□□ -2.09
CKS2P33552 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.02□□□□□ -2.09
CKS2P33552 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.02□□□□□ -2.09
CKS2P33552 MTND4P31-201ENST00000425607 1343 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AL645568.2-201ENST00000432815 1337 ntBASIC2.02□□□□□ -2.09
CKS2P33552 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CKS2P33552 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CKS2P33552 RNU6ATAC-201ENST00000408749 126 ntBASIC2.02□□□□□ -2.09
CKS2P33552 RNU2-65P-201ENST00000410162 185 ntBASIC2.02□□□□□ -2.09
CKS2P33552 RNA5SP38-201ENST00000410750 119 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AC092638.1-201ENST00000411966 1275 ntBASIC2.02□□□□□ -2.09
CKS2P33552 RPS20P25-201ENST00000412447 352 ntBASIC2.02□□□□□ -2.09
CKS2P33552 BX682237.1-201ENST00000415016 335 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.02□□□□□ -2.09
CKS2P33552 AC234775.1-201ENST00000454247 670 ntBASIC2.02□□□□□ -2.09
CKS2P33552 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.02□□□□□ -2.09
CKS2P33552 OR2A20P-203ENST00000498397 1268 ntBASIC2.02□□□□□ -2.09
CKS2P33552 HMGB1P3-201ENST00000502802 616 ntBASIC2.02□□□□□ -2.09
CKS2P33552 SNORA31.20-201ENST00000517111 133 ntBASIC2.02□□□□□ -2.09
CKS2P33552 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms