Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.65□□□□□ -1.83
CPS1P31327 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.65□□□□□ -1.83
CPS1P31327 IPMKP1-201ENST00000425988 855 ntBASIC3.65□□□□□ -1.83
CPS1P31327 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.65□□□□□ -1.83
CPS1P31327 SNORA9.3-201ENST00000516383 129 ntBASIC3.65□□□□□ -1.83
CPS1P31327 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.65□□□□□ -1.83
CPS1P31327 MIR3605-201ENST00000583214 100 ntBASIC3.65□□□□□ -1.83
CPS1P31327 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.65□□□□□ -1.83
CPS1P31327 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CPS1P31327 TTC39DP-201ENST00000416781 1688 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.64□□□□□ -1.83
CPS1P31327 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CPS1P31327 Y_RNA.269-201ENST00000364685 89 ntBASIC3.64□□□□□ -1.83
CPS1P31327 SNORA70E-201ENST00000384492 135 ntBASIC3.64□□□□□ -1.83
CPS1P31327 RPL23AP36-201ENST00000413895 458 ntBASIC3.64□□□□□ -1.83
CPS1P31327 MORF4L1P6-201ENST00000418771 268 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AL592045.1-201ENST00000429867 352 ntBASIC3.64□□□□□ -1.83
CPS1P31327 RPS27P29-201ENST00000463110 252 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AC068587.2-201ENST00000478386 781 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AC118282.1-201ENST00000506408 765 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.64□□□□□ -1.83
CPS1P31327 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.64□□□□□ -1.83
CPS1P31327 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.64□□□□□ -1.83
CPS1P31327 AC103810.6-201ENST00000606708 136 ntBASIC3.64□□□□□ -1.83
CPS1P31327 AC104237.2-201ENST00000612456 443 ntBASIC3.64□□□□□ -1.83
CPS1P31327 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CPS1P31327 SNORD114-30-201ENST00000364448 72 ntBASIC3.63□□□□□ -1.83
CPS1P31327 Y_RNA.595-201ENST00000410403 105 ntBASIC3.63□□□□□ -1.83
CPS1P31327 AC004987.3-201ENST00000413879 771 ntBASIC3.63□□□□□ -1.83
CPS1P31327 NANOGP5-201ENST00000424456 877 ntBASIC3.63□□□□□ -1.83
CPS1P31327 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.63□□□□□ -1.83
CPS1P31327 AC108729.3-201ENST00000513484 108 ntBASIC3.63□□□□□ -1.83
CPS1P31327 AC074029.1-201ENST00000552531 1044 ntBASIC3.63□□□□□ -1.83
CPS1P31327 AL020991.1-201ENST00000612314 373 ntBASIC3.63□□□□□ -1.83
CPS1P31327 CR381653.2-201ENST00000624041 768 ntBASIC3.63□□□□□ -1.83
CPS1P31327 AC110994.2-201ENST00000635481 492 ntBASIC3.63□□□□□ -1.83
CPS1P31327 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.63□□□□□ -1.83
CPS1P31327 MIR3074-201ENST00000384885 81 ntBASIC3.62□□□□□ -1.83
CPS1P31327 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.62□□□□□ -1.83
CPS1P31327 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.62□□□□□ -1.83
CPS1P31327 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.62□□□□□ -1.83
CPS1P31327 DYNLL1P6-201ENST00000503440 264 ntBASIC3.62□□□□□ -1.83
CPS1P31327 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.62□□□□□ -1.83
CPS1P31327 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.62□□□□□ -1.83
CPS1P31327 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
CPS1P31327 AL355836.1-201ENST00000555951 870 ntBASIC3.62□□□□□ -1.83
CPS1P31327 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CPS1P31327 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.61□□□□□ -1.83
CPS1P31327 GTF2H2B-203ENST00000508065 1432 ntBASIC3.61□□□□□ -1.83
CPS1P31327 RPLP0P7-201ENST00000416050 667 ntBASIC3.61□□□□□ -1.83
CPS1P31327 AL121882.1-201ENST00000422893 417 ntBASIC3.61□□□□□ -1.83
CPS1P31327 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.61□□□□□ -1.83
CPS1P31327 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.61□□□□□ -1.83
CPS1P31327 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.61□□□□□ -1.83
CPS1P31327 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
CPS1P31327 PRELID3BP7-201ENST00000503606 469 ntBASIC3.61□□□□□ -1.83
CPS1P31327 AC119751.1-201ENST00000513357 765 ntBASIC3.61□□□□□ -1.83
CPS1P31327 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.61□□□□□ -1.83
CPS1P31327 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.61□□□□□ -1.83
CPS1P31327 AC083760.1-201ENST00000589621 670 ntBASIC3.61□□□□□ -1.83
CPS1P31327 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.61□□□□□ -1.83
CPS1P31327 AL136981.2-201ENST00000617319 734 ntBASIC3.61□□□□□ -1.83
CPS1P31327 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPS1P31327 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
CPS1P31327 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CPS1P31327 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.6□□□□□ -1.83
CPS1P31327 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 AL359511.1-201ENST00000402970 211 ntBASIC3.6□□□□□ -1.83
CPS1P31327 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.6□□□□□ -1.83
CPS1P31327 AL592437.1-201ENST00000443781 492 ntBASIC3.6□□□□□ -1.83
CPS1P31327 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
CPS1P31327 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
CPS1P31327 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.6□□□□□ -1.83
CPS1P31327 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.6□□□□□ -1.83
CPS1P31327 AC100870.1-201ENST00000522035 505 ntBASIC3.6□□□□□ -1.83
CPS1P31327 PDCL2P2-201ENST00000533651 189 ntBASIC3.6□□□□□ -1.83
CPS1P31327 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CPS1P31327 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.6□□□□□ -1.83
CPS1P31327 AC007342.7-201ENST00000624610 2337 ntBASIC3.6□□□□□ -1.83
CPS1P31327 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 AC048351.1-201ENST00000420064 602 ntBASIC3.6□□□□□ -1.83
CPS1P31327 ST13P20-201ENST00000447996 1065 ntBASIC3.6□□□□□ -1.83
CPS1P31327 RPL23AP42-201ENST00000471152 471 ntBASIC3.6□□□□□ -1.83
CPS1P31327 TRBV1-201ENST00000476502 284 ntBASIC3.6□□□□□ -1.83
CPS1P31327 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.6□□□□□ -1.83
CPS1P31327 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.6□□□□□ -1.83
CPS1P31327 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.6□□□□□ -1.83
CPS1P31327 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CPS1P31327 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CPS1P31327 AC138915.3-201ENST00000562908 1389 ntBASIC3.59□□□□□ -1.83
CPS1P31327 RNU6-14P-201ENST00000384630 106 ntBASIC3.59□□□□□ -1.84
CPS1P31327 MIR137-201ENST00000385223 102 ntBASIC3.59□□□□□ -1.84
CPS1P31327 MIR181B1-201ENST00000385240 110 ntBASIC3.59□□□□□ -1.84
CPS1P31327 AC080125.1-201ENST00000414888 684 ntBASIC3.59□□□□□ -1.84
CPS1P31327 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.59□□□□□ -1.84
CPS1P31327 RPL9P6-201ENST00000492764 598 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms