Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HOXC12P31275 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HOXC12P31275 RNA5SP507-201ENST00000363603 121 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 RNA5SP91-201ENST00000390902 119 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 snosnR66.1-201ENST00000391095 99 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 RPL32P23-201ENST00000397237 405 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC009804.1-201ENST00000400949 179 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AL122016.1-201ENST00000403365 367 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 RPL37P18-201ENST00000411602 243 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 OR1AA1P-201ENST00000419597 916 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 DUTP6-201ENST00000425573 462 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC12P31275 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC12P31275 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 RN7SL172P-201ENST00000460535 303 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 RPL37P6-202ENST00000464216 403 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC126389.1-201ENST00000477436 290 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC026427.2-201ENST00000506228 536 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 SNORD27.1-201ENST00000516319 72 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 RNU7-51P-201ENST00000516560 62 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 Y_RNA.701-201ENST00000516812 110 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 RNU7-30P-201ENST00000516835 62 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 BTF3P12-201ENST00000519620 469 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 HMGB1P41-201ENST00000520234 440 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.96□□□□□ -1.62
HOXC12P31275 MRPS16P1-201ENST00000523462 412 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 OR5BN1P-201ENST00000532955 829 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 HMGN2P6-201ENST00000551091 273 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC126615.2-201ENST00000553003 515 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 HMGB3P26-201ENST00000560051 582 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC015720.2-201ENST00000567709 334 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 MIR4311-201ENST00000580794 100 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 AC010591.1-201ENST00000603941 649 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXC12P31275 AC009248.2-201ENST00000619826 254 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC12P31275 AC090574.1-201ENST00000623186 233 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 AL136313.1-201ENST00000624804 202 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HOXC12P31275 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC12P31275 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HOXC12P31275 ASNSP3-201ENST00000451989 1306 ntBASIC4.96□□□□□ -1.62
HOXC12P31275 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXC12P31275 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HOXC12P31275 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 SRRM1P3-201ENST00000426911 2678 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXC12P31275 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HOXC12P31275 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 RNA5SP30-201ENST00000365552 115 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RNU6-641P-201ENST00000384006 107 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 MIR551A-201ENST00000385042 96 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 MIR454-201ENST00000390180 115 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RNU11-4P-201ENST00000391149 133 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RNU6-510P-201ENST00000391239 108 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RN7SKP32-201ENST00000410167 303 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXC12P31275 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 SRIP2-201ENST00000428470 166 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RPL34P6-201ENST00000432390 345 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 MTATP6P16-201ENST00000434543 526 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RPL12P3-201ENST00000440080 396 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RPL5P25-201ENST00000441148 775 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC091685.2-201ENST00000454924 864 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RN7SL51P-201ENST00000468230 285 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 RN7SL583P-201ENST00000475692 287 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 NRBF2P4-201ENST00000520874 850 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC107953.1-201ENST00000522216 297 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 HIGD1AP5-201ENST00000529959 259 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AC103843.2-201ENST00000530523 682 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 OR5B10P-201ENST00000532869 642 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.95□□□□□ -1.62
HOXC12P31275 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.95□□□□□ -1.62
HOXC12P31275 SETP7-201ENST00000552169 453 ntBASIC4.95□□□□□ -1.62
HOXC12P31275 AL133153.1-201ENST00000557756 303 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms