Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.96□□□□□ -1.94
COL4A5P29400 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A5P29400 MIR708-201ENST00000390708 88 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AL512633.1-201ENST00000399931 655 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 SNORA81-201ENST00000408493 178 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AMD1P2-201ENST00000412936 992 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AC108860.1-201ENST00000484521 383 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A5P29400 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A5P29400 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.95□□□□□ -1.94
COL4A5P29400 AP001317.1-201ENST00000531194 960 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AC123768.4-201ENST00000616244 701 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AC092628.2-201ENST00000622492 339 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.95□□□□□ -1.94
COL4A5P29400 AC026634.1-201ENST00000634369 198 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 CRYM-AS1-204ENST00000637983 556 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A5P29400 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
COL4A5P29400 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A5P29400 AC107021.2-201ENST00000567714 2095 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 RNU6-1263P-201ENST00000384601 106 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.95□□□□□ -1.94
COL4A5P29400 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.95□□□□□ -1.94
COL4A5P29400 RPL23AP45-201ENST00000476406 468 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A5P29400 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.95□□□□□ -1.94
COL4A5P29400 CKS1BP1-201ENST00000555221 240 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 RPL23AP84-201ENST00000571193 464 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A5P29400 AC078899.5-201ENST00000612475 178 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AL162233.1-201ENST00000620014 944 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 AP002967.1-201ENST00000624203 539 ntBASIC2.95□□□□□ -1.94
COL4A5P29400 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A5P29400 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A5P29400 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.94□□□□□ -1.94
COL4A5P29400 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A5P29400 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL4A5P29400 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.94□□□□□ -1.94
COL4A5P29400 AC091564.4-201ENST00000533934 2194 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 RNU1-73P-201ENST00000383971 164 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 OR9N1P-201ENST00000491296 333 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A5P29400 AC067838.1-201ENST00000606064 577 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 AC096586.2-201ENST00000610260 441 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 AP001005.3-201ENST00000622049 129 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A5P29400 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A5P29400 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
COL4A5P29400 AC104454.1-201ENST00000421341 1401 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 Z73965.1-201ENST00000623412 2297 ntBASIC2.94□□□□□ -1.94
COL4A5P29400 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A5P29400 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 AL589994.1-201ENST00000404962 340 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 MIR1183-201ENST00000408856 89 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A5P29400 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A5P29400 AC092851.1-201ENST00000535964 478 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A5P29400 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A5P29400 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A5P29400 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A5P29400 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.93□□□□□ -1.94
COL4A5P29400 MTND2P13-201ENST00000577438 1039 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 AL713998.2-201ENST00000604538 1198 ntBASIC2.93□□□□□ -1.94
COL4A5P29400 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A5P29400 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A5P29400 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.93□□□□□ -1.94
COL4A5P29400 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
COL4A5P29400 AC004925.1-201ENST00000624256 2706 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 OR52B1P-201ENST00000316506 909 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-1320P-201ENST00000390838 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-1269P-201ENST00000391139 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RPL23AP48-201ENST00000406913 488 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 HMGB3P10-201ENST00000434734 572 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 MTND4LP12-201ENST00000448237 295 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-599P-201ENST00000459383 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-1193P-201ENST00000459461 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL4A5P29400 AP000857.1-201ENST00000532151 543 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A5P29400 AL121839.1-201ENST00000556233 1185 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A5P29400 AADACP1-206ENST00000561502 1193 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.92□□□□□ -1.94
COL4A5P29400 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A5P29400 AC103710.3-201ENST00000608157 948 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A5P29400 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-368P-201ENST00000620928 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 RNU6-538P-201ENST00000622329 107 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL4A5P29400 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.92□□□□□ -1.94
COL4A5P29400 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.92□□□□□ -1.94
COL4A5P29400 Y_RNA.508-201ENST00000384502 114 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 AL590004.2-201ENST00000404787 371 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 MIR1287-201ENST00000408492 90 ntBASIC2.92□□□□□ -1.94
COL4A5P29400 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms