Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 AC025750.1-201ENST00000399891 379 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL021407.1-201ENST00000404531 386 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 AC004022.2-201ENST00000413824 193 ntBASIC3.44□□□□□ -1.86
SHC1P29353 TIMM9P2-201ENST00000419324 266 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC098592.1-201ENST00000419352 333 ntBASIC3.44□□□□□ -1.86
SHC1P29353 RPL17P36-201ENST00000420302 549 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC007435.1-201ENST00000421086 415 ntBASIC3.44□□□□□ -1.86
SHC1P29353 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SHC1P29353 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.44□□□□□ -1.86
SHC1P29353 SNORA71B-202ENST00000439232 272 ntBASIC3.44□□□□□ -1.86
SHC1P29353 COX6CP18-201ENST00000448769 222 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 AC092045.1-201ENST00000495716 1231 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL139099.1-201ENST00000497398 403 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHC1P29353 HMGB1P21-201ENST00000502313 581 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.44□□□□□ -1.86
SHC1P29353 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.44□□□□□ -1.86
SHC1P29353 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHC1P29353 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHC1P29353 AC007424.1-203ENST00000554613 687 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 AGGF1P8-201ENST00000562979 1000 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.44□□□□□ -1.86
SHC1P29353 AC107982.3-201ENST00000584957 985 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.44□□□□□ -1.86
SHC1P29353 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 VN1R88P-201ENST00000596787 292 ntBASIC3.44□□□□□ -1.86
SHC1P29353 BNIP3P26-201ENST00000600827 554 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 AC115621.1-201ENST00000604653 858 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC135507.1-201ENST00000607214 561 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AC122133.1-201ENST00000613964 233 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL391261.4-201ENST00000616012 481 ntBASIC3.44□□□□□ -1.86
SHC1P29353 U7.8-201ENST00000619968 63 ntBASIC3.44□□□□□ -1.86
SHC1P29353 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.44□□□□□ -1.86
SHC1P29353 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.44□□□□□ -1.86
SHC1P29353 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.44□□□□□ -1.86
SHC1P29353 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.44□□□□□ -1.86
SHC1P29353 ATE1-AS1-202ENST00000636460 506 ntBASIC3.44□□□□□ -1.86
SHC1P29353 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SHC1P29353 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SHC1P29353 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
SHC1P29353 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SHC1P29353 AC022031.1-201ENST00000585985 2593 ntBASIC3.43□□□□□ -1.86
SHC1P29353 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 Y_RNA.51-201ENST00000362725 102 ntBASIC3.43□□□□□ -1.86
SHC1P29353 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHC1P29353 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHC1P29353 RNU6-1200P-201ENST00000384162 107 ntBASIC3.43□□□□□ -1.86
SHC1P29353 SNORD116-4-201ENST00000384733 96 ntBASIC3.43□□□□□ -1.86
SHC1P29353 SNORD65.1-201ENST00000390889 71 ntBASIC3.43□□□□□ -1.86
SHC1P29353 RPL32P23-201ENST00000397237 405 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AL590084.2-201ENST00000401481 382 ntBASIC3.43□□□□□ -1.86
SHC1P29353 RNA5SP80-201ENST00000410475 111 ntBASIC3.43□□□□□ -1.86
SHC1P29353 RPL30P2-201ENST00000414021 291 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 HSFY4P-201ENST00000415994 1181 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 AL139247.1-201ENST00000422768 325 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AL445584.1-201ENST00000431451 330 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.43□□□□□ -1.86
SHC1P29353 MTCYBP3-201ENST00000445588 1137 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 AC084198.1-201ENST00000477747 402 ntBASIC3.43□□□□□ -1.86
SHC1P29353 GAPDHP39-201ENST00000481866 979 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.43□□□□□ -1.86
SHC1P29353 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 AC020593.1-201ENST00000507399 299 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC021146.1-201ENST00000511202 716 ntBASIC3.43□□□□□ -1.86
SHC1P29353 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 IGHV3-32-201ENST00000519182 355 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC007991.1-201ENST00000522680 631 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 CYCSP30-201ENST00000546447 172 ntBASIC3.43□□□□□ -1.86
SHC1P29353 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SHC1P29353 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.43□□□□□ -1.86
SHC1P29353 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.43□□□□□ -1.86
SHC1P29353 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.43□□□□□ -1.86
SHC1P29353 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.43□□□□□ -1.86
SHC1P29353 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms