Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC111000.2-201ENST00000507775 550 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 RNU6-714P-201ENST00000516963 103 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC135001.1-201ENST00000544546 283 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC008759.1-201ENST00000589783 983 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC112187.2-201ENST00000604345 283 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 AL021997.2-201ENST00000615674 271 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.02□□□□□ -1.77
ABCD3P28288 FP325313.1-201ENST00000638228 703 ntBASIC4.02□□□□□ -1.77
ABCD3P28288 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.02□□□□□ -1.77
ABCD3P28288 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.02□□□□□ -1.77
ABCD3P28288 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ABCD3P28288 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ABCD3P28288 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ABCD3P28288 RNU6-97P-201ENST00000363387 104 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 SNORD3H-201ENST00000384486 214 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 MIR141-201ENST00000384975 95 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ABCD3P28288 RNU4-25P-201ENST00000410569 230 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 RNA5SP104-201ENST00000410989 118 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ABCD3P28288 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 TOMM22P1-201ENST00000418578 312 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 USP9YP26-201ENST00000421008 661 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 LSM1P1-201ENST00000438629 273 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 AL138799.3-201ENST00000438968 350 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 RPL23AP52-201ENST00000439311 478 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AL121871.1-201ENST00000443413 436 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC021678.1-201ENST00000505195 936 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.01□□□□□ -1.77
ABCD3P28288 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC034159.1-201ENST00000513885 583 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 OR5D17P-201ENST00000531492 978 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 AL352979.3-201ENST00000553515 247 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.01□□□□□ -1.77
ABCD3P28288 MTND6P33-201ENST00000571794 183 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC008088.1-201ENST00000580993 280 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.01□□□□□ -1.77
ABCD3P28288 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC013444.2-201ENST00000603317 787 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC008638.3-201ENST00000603341 463 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC006254.3-201ENST00000603353 884 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 AC114878.2-201ENST00000604863 1251 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 TUG1_1.1-201ENST00000610654 145 ntBASIC4.01□□□□□ -1.77
ABCD3P28288 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ABCD3P28288 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
ABCD3P28288 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4□□□□□ -1.77
ABCD3P28288 AL645937.1-201ENST00000641739 1652 ntBASIC4□□□□□ -1.77
ABCD3P28288 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
ABCD3P28288 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4□□□□□ -1.77
ABCD3P28288 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4□□□□□ -1.77
ABCD3P28288 RNU6-1155P-201ENST00000363554 107 ntBASIC4□□□□□ -1.77
ABCD3P28288 RNA5SP175-201ENST00000364275 119 ntBASIC4□□□□□ -1.77
ABCD3P28288 RNA5SP513-201ENST00000364648 118 ntBASIC4□□□□□ -1.77
ABCD3P28288 SNORD116-8-201ENST00000384365 95 ntBASIC4□□□□□ -1.77
ABCD3P28288 RNU2-47P-201ENST00000410649 186 ntBASIC4□□□□□ -1.77
ABCD3P28288 MIR1911-201ENST00000410783 80 ntBASIC4□□□□□ -1.77
ABCD3P28288 AC011933.1-201ENST00000413334 321 ntBASIC4□□□□□ -1.77
ABCD3P28288 UBTFL3-201ENST00000418934 1024 ntBASIC4□□□□□ -1.77
ABCD3P28288 BEND7P1-201ENST00000422058 457 ntBASIC4□□□□□ -1.77
ABCD3P28288 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4□□□□□ -1.77
ABCD3P28288 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4□□□□□ -1.77
ABCD3P28288 ZNF736P5Y-201ENST00000451173 805 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms