Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC092809.3-201ENST00000415453 231 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.58□□□□□ -1.36
COL9A1P20849 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC010655.1-201ENST00000449336 292 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 AL445433.1-201ENST00000457507 257 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 AC022133.1-201ENST00000490961 571 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC018552.1-201ENST00000562099 811 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 AC106785.4-201ENST00000569492 412 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC006077.1-201ENST00000604746 343 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 AL365222.1-201ENST00000614661 98 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC116667.2-201ENST00000641075 823 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 MTND5P9-201ENST00000503854 1755 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC022905.1-201ENST00000503430 3048 ntBASIC6.58□□□□□ -1.36
COL9A1P20849 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.58□□□□□ -1.36
COL9A1P20849 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
COL9A1P20849 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL9A1P20849 MAPK10-298ENST00000641297 3040 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
COL9A1P20849 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.58□□□□□ -1.36
COL9A1P20849 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL9A1P20849 AC023245.2-201ENST00000530760 2978 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.57□□□□□ -1.36
COL9A1P20849 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
COL9A1P20849 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 AC138915.4-201ENST00000565549 4147 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 CDC27P2-201ENST00000425026 1922 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 Y_RNA.273-201ENST00000364703 102 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 SNORD51-201ENST00000384320 80 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL9A1P20849 RNU6-918P-201ENST00000391219 106 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.57□□□□□ -1.36
COL9A1P20849 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 CEACAMP1-201ENST00000434624 1035 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC006466.1-201ENST00000438721 289 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 CEACAMP7-201ENST00000444105 496 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 SNORD116-28-201ENST00000516123 91 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 RN7SKP60-201ENST00000516985 239 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 MIR2355-201ENST00000517199 87 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC6.57□□□□□ -1.36
COL9A1P20849 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
COL9A1P20849 BDH2P1-201ENST00000602288 736 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 IMMP1LP3-201ENST00000604197 224 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 MIR6085-201ENST00000618314 110 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC131009.3-201ENST00000621809 287 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 AC120057.5-201ENST00000623840 154 ntBASIC6.57□□□□□ -1.36
COL9A1P20849 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
COL9A1P20849 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL9A1P20849 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL9A1P20849 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL9A1P20849 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL9A1P20849 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC6.56□□□□□ -1.36
COL9A1P20849 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL9A1P20849 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.56□□□□□ -1.36
COL9A1P20849 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL9A1P20849 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.56□□□□□ -1.36
COL9A1P20849 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL9A1P20849 AC005839.1-201ENST00000624148 3213 ntBASIC6.56□□□□□ -1.36
COL9A1P20849 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms