Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC113195.1-201ENST00000579952 141 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC005357.1-201ENST00000588399 301 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC100812.1-201ENST00000607622 580 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC006157.1-201ENST00000611750 366 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 RN7SL544P-201ENST00000617232 284 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 RN7SL763P-201ENST00000620922 284 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 AC068870.1-201ENST00000563737 2455 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
NFKB1P19838 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 BCORP1-203ENST00000513194 5093 ntBASIC5.76□□□□□ -1.49
NFKB1P19838 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.76□□□□□ -1.49
NFKB1P19838 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 AL121886.1-201ENST00000358609 435 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.75□□□□□ -1.49
NFKB1P19838 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 AL354868.1-201ENST00000417077 482 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 PDSS1P1-201ENST00000422953 1114 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AL669831.1-202ENST00000428504 417 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 RPL36AP6-201ENST00000435770 321 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 RN7SL809P-201ENST00000482040 297 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AC104564.1-201ENST00000493028 407 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 RPS17P5-201ENST00000498293 408 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.75□□□□□ -1.49
NFKB1P19838 Y_RNA.661-201ENST00000516003 99 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 RNU6-1016P-201ENST00000516689 94 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.75□□□□□ -1.49
NFKB1P19838 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC135001.1-201ENST00000544546 283 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.75□□□□□ -1.49
NFKB1P19838 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC011890.2-201ENST00000613393 294 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AL096712.1-201ENST00000614561 159 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 FAM157A-202ENST00000615155 405 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 AL357559.1-201ENST00000622228 274 ntBASIC5.75□□□□□ -1.49
NFKB1P19838 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NFKB1P19838 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
NFKB1P19838 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
NFKB1P19838 AC235565.1-201ENST00000456962 1325 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
NFKB1P19838 AC007342.5-201ENST00000571340 2142 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 AC087516.1-201ENST00000561236 2428 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
NFKB1P19838 MIR375-201ENST00000362103 64 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 SNORD3E-201ENST00000362899 217 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 SNORD115-7-201ENST00000365306 82 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 HMGB1P20-201ENST00000402555 677 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.74□□□□□ -1.49
NFKB1P19838 COX6CP15-201ENST00000426313 211 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AC099670.2-201ENST00000435130 321 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.74□□□□□ -1.49
NFKB1P19838 AL138899.2-201ENST00000439139 499 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 RPL23AP89-201ENST00000439324 255 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AC019185.1-201ENST00000442718 389 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.74□□□□□ -1.49
NFKB1P19838 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 SNRPCP3-201ENST00000474888 476 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.74□□□□□ -1.49
NFKB1P19838 AL139099.1-201ENST00000497398 403 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AC008526.1-201ENST00000509149 338 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 AC016559.2-201ENST00000510759 359 ntBASIC5.74□□□□□ -1.49
NFKB1P19838 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.74□□□□□ -1.49
NFKB1P19838 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
NFKB1P19838 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.74□□□□□ -1.49
NFKB1P19838 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.74□□□□□ -1.49
NFKB1P19838 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms