Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 AC007390.2-201ENST00000606229 3803 ntBASIC2.03□□□□□ -2.08
ACANP16112 AL359715.4-201ENST00000606629 1436 ntBASIC2.03□□□□□ -2.08
ACANP16112 Y_RNA.122-201ENST00000363331 96 ntBASIC2.03□□□□□ -2.08
ACANP16112 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 AL024474.1-201ENST00000404655 591 ntBASIC2.03□□□□□ -2.08
ACANP16112 RNA5SP274-201ENST00000410484 108 ntBASIC2.03□□□□□ -2.08
ACANP16112 BTG3P1-201ENST00000435859 716 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC007677.1-201ENST00000445757 515 ntBASIC2.03□□□□□ -2.08
ACANP16112 RPL23AP45-201ENST00000476406 468 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC106872.2-201ENST00000494303 480 ntBASIC2.03□□□□□ -2.08
ACANP16112 NARSP2-201ENST00000518524 679 ntBASIC2.03□□□□□ -2.08
ACANP16112 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.03□□□□□ -2.08
ACANP16112 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.03□□□□□ -2.08
ACANP16112 AC128657.1-201ENST00000549459 145 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC074029.1-201ENST00000552531 1044 ntBASIC2.03□□□□□ -2.08
ACANP16112 OR4U1P-201ENST00000554958 912 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC026464.5-201ENST00000562497 722 ntBASIC2.03□□□□□ -2.08
ACANP16112 RPL23AP84-201ENST00000571193 464 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC020895.1-201ENST00000595362 272 ntBASIC2.03□□□□□ -2.08
ACANP16112 RPP40P2-201ENST00000603596 712 ntBASIC2.03□□□□□ -2.08
ACANP16112 AC110994.2-201ENST00000635481 492 ntBASIC2.03□□□□□ -2.08
ACANP16112 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
ACANP16112 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
ACANP16112 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.03□□□□□ -2.09
ACANP16112 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ACANP16112 AL359511.1-201ENST00000402970 211 ntBASIC2.02□□□□□ -2.09
ACANP16112 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.02□□□□□ -2.09
ACANP16112 RN7SKP43-201ENST00000516173 320 ntBASIC2.02□□□□□ -2.09
ACANP16112 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.02□□□□□ -2.09
ACANP16112 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
ACANP16112 AC018630.1-201ENST00000541376 925 ntBASIC2.02□□□□□ -2.09
ACANP16112 MIR4635-201ENST00000583759 79 ntBASIC2.02□□□□□ -2.09
ACANP16112 USP44-208ENST00000552440 1818 ntTSL 5 BASIC2.02□□□□□ -2.09
ACANP16112 AC027514.1-201ENST00000588561 1603 ntBASIC2.02□□□□□ -2.09
ACANP16112 MIR148B-201ENST00000362252 99 ntBASIC2.02□□□□□ -2.09
ACANP16112 SNORA46-201ENST00000384762 135 ntBASIC2.02□□□□□ -2.09
ACANP16112 NPM1P10-201ENST00000398310 865 ntBASIC2.02□□□□□ -2.09
ACANP16112 RPL32P35-201ENST00000415214 394 ntBASIC2.02□□□□□ -2.09
ACANP16112 AC245291.1-201ENST00000419501 328 ntBASIC2.02□□□□□ -2.09
ACANP16112 AC108667.1-201ENST00000428618 249 ntBASIC2.02□□□□□ -2.09
ACANP16112 AL354710.1-201ENST00000453641 246 ntBASIC2.02□□□□□ -2.09
ACANP16112 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.02□□□□□ -2.09
ACANP16112 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.02□□□□□ -2.09
ACANP16112 SNORA31.1-201ENST00000515993 133 ntBASIC2.02□□□□□ -2.09
ACANP16112 SNORA31.5-201ENST00000516190 133 ntBASIC2.02□□□□□ -2.09
ACANP16112 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.02□□□□□ -2.09
ACANP16112 AC061975.8-201ENST00000587058 721 ntBASIC2.02□□□□□ -2.09
ACANP16112 AC010620.2-201ENST00000600135 313 ntBASIC2.02□□□□□ -2.09
ACANP16112 AC023813.4-201ENST00000607580 580 ntBASIC2.02□□□□□ -2.09
ACANP16112 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.02□□□□□ -2.09
ACANP16112 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.01□□□□□ -2.09
ACANP16112 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
ACANP16112 RNA5SP88-201ENST00000365560 109 ntBASIC2.01□□□□□ -2.09
ACANP16112 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.01□□□□□ -2.09
ACANP16112 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.01□□□□□ -2.09
ACANP16112 MTCO1P42-201ENST00000457379 726 ntBASIC2.01□□□□□ -2.09
ACANP16112 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.01□□□□□ -2.09
ACANP16112 ACTR6P1-201ENST00000514311 1104 ntBASIC2.01□□□□□ -2.09
ACANP16112 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.01□□□□□ -2.09
ACANP16112 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 AC093673.2-201ENST00000609674 331 ntBASIC2.01□□□□□ -2.09
ACANP16112 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
ACANP16112 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.01□□□□□ -2.09
ACANP16112 Z73965.1-201ENST00000623412 2297 ntBASIC2.01□□□□□ -2.09
ACANP16112 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 SNORA26.9-201ENST00000391322 122 ntBASIC2.01□□□□□ -2.09
ACANP16112 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.01□□□□□ -2.09
ACANP16112 SCARNA17.1-201ENST00000516211 143 ntBASIC2.01□□□□□ -2.09
ACANP16112 SCARNA17.2-201ENST00000516334 143 ntBASIC2.01□□□□□ -2.09
ACANP16112 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.01□□□□□ -2.09
ACANP16112 SCARNA17.4-201ENST00000614296 143 ntBASIC2.01□□□□□ -2.09
ACANP16112 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.01□□□□□ -2.09
ACANP16112 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.01□□□□□ -2.09
ACANP16112 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
ACANP16112 AL359893.1-201ENST00000447628 1580 ntBASIC2□□□□□ -2.09
ACANP16112 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2□□□□□ -2.09
ACANP16112 MIR378A-201ENST00000362177 66 ntBASIC2□□□□□ -2.09
ACANP16112 RNU6-321P-201ENST00000410912 106 ntBASIC2□□□□□ -2.09
ACANP16112 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2□□□□□ -2.09
ACANP16112 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2□□□□□ -2.09
ACANP16112 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2□□□□□ -2.09
ACANP16112 AL024509.2-201ENST00000493462 493 ntBASIC2□□□□□ -2.09
ACANP16112 AK6P1-201ENST00000540219 478 ntBASIC2□□□□□ -2.09
ACANP16112 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2□□□□□ -2.09
ACANP16112 HMGN2P47-201ENST00000559378 272 ntBASIC2□□□□□ -2.09
ACANP16112 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2□□□□□ -2.09
ACANP16112 AC069528.2-201ENST00000624849 1991 ntBASIC2□□□□□ -2.09
ACANP16112 BX005019.1-201ENST00000561881 1810 ntBASIC2□□□□□ -2.09
ACANP16112 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2□□□□□ -2.09
ACANP16112 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2□□□□□ -2.09
ACANP16112 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2□□□□□ -2.09
ACANP16112 FAM35BP-202ENST00000497389 3337 ntBASIC2□□□□□ -2.09
ACANP16112 AL365396.1-201ENST00000430854 671 ntBASIC2□□□□□ -2.09
ACANP16112 AC103975.1-201ENST00000482506 483 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms