Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.14□□□□□ -1.75
CFTRP13569 TRBV1-201ENST00000476502 284 ntBASIC4.14□□□□□ -1.75
CFTRP13569 AC123904.3-201ENST00000547218 814 ntBASIC4.14□□□□□ -1.75
CFTRP13569 AC074029.1-201ENST00000552531 1044 ntBASIC4.14□□□□□ -1.75
CFTRP13569 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.14□□□□□ -1.75
CFTRP13569 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
CFTRP13569 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.14□□□□□ -1.75
CFTRP13569 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.14□□□□□ -1.75
CFTRP13569 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CFTRP13569 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CFTRP13569 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
CFTRP13569 VTA1P1-201ENST00000414044 866 ntBASIC4.13□□□□□ -1.75
CFTRP13569 AC018634.1-201ENST00000437554 401 ntBASIC4.13□□□□□ -1.75
CFTRP13569 RPL23AP49-201ENST00000492925 468 ntBASIC4.13□□□□□ -1.75
CFTRP13569 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CFTRP13569 AC018630.1-201ENST00000541376 925 ntBASIC4.13□□□□□ -1.75
CFTRP13569 SNRPGP18-201ENST00000553000 214 ntBASIC4.13□□□□□ -1.75
CFTRP13569 MIR5007-201ENST00000583098 95 ntBASIC4.13□□□□□ -1.75
CFTRP13569 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.13□□□□□ -1.75
CFTRP13569 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CFTRP13569 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CFTRP13569 RPS20P25-201ENST00000412447 352 ntBASIC4.12□□□□□ -1.75
CFTRP13569 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.12□□□□□ -1.75
CFTRP13569 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.12□□□□□ -1.75
CFTRP13569 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.12□□□□□ -1.75
CFTRP13569 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.12□□□□□ -1.75
CFTRP13569 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CFTRP13569 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.12□□□□□ -1.75
CFTRP13569 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CFTRP13569 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CFTRP13569 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CFTRP13569 TTC39DP-201ENST00000416781 1688 ntBASIC4.12□□□□□ -1.75
CFTRP13569 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CFTRP13569 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.12□□□□□ -1.75
CFTRP13569 EIF5P1-201ENST00000400019 1231 ntBASIC4.11□□□□□ -1.75
CFTRP13569 AC013410.1-201ENST00000436223 1232 ntBASIC4.11□□□□□ -1.75
CFTRP13569 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.11□□□□□ -1.75
CFTRP13569 RPL7P52-201ENST00000449200 742 ntBASIC4.11□□□□□ -1.75
CFTRP13569 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.11□□□□□ -1.75
CFTRP13569 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.11□□□□□ -1.75
CFTRP13569 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.11□□□□□ -1.75
CFTRP13569 MIR5092-201ENST00000583139 88 ntBASIC4.11□□□□□ -1.75
CFTRP13569 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.11□□□□□ -1.75
CFTRP13569 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.11□□□□□ -1.75
CFTRP13569 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CFTRP13569 ZNF355P-201ENST00000427301 3216 ntBASIC4.11□□□□□ -1.75
CFTRP13569 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CFTRP13569 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.11□□□□□ -1.75
CFTRP13569 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CFTRP13569 AL450263.2-201ENST00000439400 589 ntBASIC4.11□□□□□ -1.75
CFTRP13569 AL662791.1-201ENST00000441992 928 ntBASIC4.11□□□□□ -1.75
CFTRP13569 HMGB1P15-201ENST00000453854 435 ntBASIC4.11□□□□□ -1.75
CFTRP13569 AC026436.1-201ENST00000510537 270 ntBASIC4.11□□□□□ -1.75
CFTRP13569 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.11□□□□□ -1.75
CFTRP13569 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.11□□□□□ -1.75
CFTRP13569 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.11□□□□□ -1.75
CFTRP13569 AL162233.1-201ENST00000620014 944 ntBASIC4.11□□□□□ -1.75
CFTRP13569 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CFTRP13569 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CFTRP13569 CUL1P1-201ENST00000509510 2425 ntBASIC4.1□□□□□ -1.75
CFTRP13569 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CFTRP13569 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CFTRP13569 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CFTRP13569 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CFTRP13569 Y_RNA.4-201ENST00000362333 112 ntBASIC4.1□□□□□ -1.75
CFTRP13569 AC133134.1-201ENST00000466800 359 ntBASIC4.1□□□□□ -1.75
CFTRP13569 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.1□□□□□ -1.75
CFTRP13569 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
CFTRP13569 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.1□□□□□ -1.75
CFTRP13569 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.09□□□□□ -1.75
CFTRP13569 Z98742.2-201ENST00000431564 187 ntBASIC4.09□□□□□ -1.75
CFTRP13569 AC104389.3-201ENST00000445629 235 ntBASIC4.09□□□□□ -1.75
CFTRP13569 HSPE1P18-201ENST00000517602 280 ntBASIC4.09□□□□□ -1.75
CFTRP13569 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.09□□□□□ -1.75
CFTRP13569 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.09□□□□□ -1.75
CFTRP13569 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CFTRP13569 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CFTRP13569 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CFTRP13569 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CFTRP13569 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CFTRP13569 AL512646.1-201ENST00000269395 1077 ntBASIC4.08□□□□□ -1.76
CFTRP13569 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CFTRP13569 AC107081.1-201ENST00000414975 361 ntBASIC4.08□□□□□ -1.76
CFTRP13569 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.08□□□□□ -1.76
CFTRP13569 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.08□□□□□ -1.76
CFTRP13569 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.08□□□□□ -1.76
CFTRP13569 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CFTRP13569 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.08□□□□□ -1.76
CFTRP13569 ACTR6P1-201ENST00000514311 1104 ntBASIC4.08□□□□□ -1.76
CFTRP13569 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC4.08□□□□□ -1.76
CFTRP13569 CKS1BP7-201ENST00000522230 235 ntBASIC4.08□□□□□ -1.76
CFTRP13569 OR5BN1P-201ENST00000532955 829 ntBASIC4.08□□□□□ -1.76
CFTRP13569 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CFTRP13569 AL358913.1-201ENST00000554342 121 ntBASIC4.08□□□□□ -1.76
CFTRP13569 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.08□□□□□ -1.76
CFTRP13569 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.08□□□□□ -1.76
CFTRP13569 AC067747.1-201ENST00000608026 250 ntBASIC4.08□□□□□ -1.76
CFTRP13569 AC110994.2-201ENST00000635481 492 ntBASIC4.08□□□□□ -1.76
CFTRP13569 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.07□□□□□ -1.76
CFTRP13569 MTND5P19-201ENST00000424872 1794 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms