Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.21□□□□□ -1.74
TOP2AP11388 RNA5SP380-201ENST00000517190 98 ntBASIC4.21□□□□□ -1.74
TOP2AP11388 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.21□□□□□ -1.74
TOP2AP11388 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.21□□□□□ -1.74
TOP2AP11388 AL139286.1-201ENST00000604465 483 ntBASIC4.21□□□□□ -1.74
TOP2AP11388 AC022960.2-201ENST00000616300 666 ntBASIC4.21□□□□□ -1.74
TOP2AP11388 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.2□□□□□ -1.74
TOP2AP11388 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
TOP2AP11388 RPS3AP26-201ENST00000398259 784 ntBASIC4.2□□□□□ -1.74
TOP2AP11388 RNA5SP129-201ENST00000410276 118 ntBASIC4.2□□□□□ -1.74
TOP2AP11388 AC104389.3-201ENST00000445629 235 ntBASIC4.2□□□□□ -1.74
TOP2AP11388 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.2□□□□□ -1.74
TOP2AP11388 AC012119.1-201ENST00000603184 222 ntBASIC4.2□□□□□ -1.74
TOP2AP11388 AC092628.2-201ENST00000622492 339 ntBASIC4.2□□□□□ -1.74
TOP2AP11388 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
TOP2AP11388 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.19□□□□□ -1.74
TOP2AP11388 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
TOP2AP11388 MIR3074-201ENST00000384885 81 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 HSPD1P16-201ENST00000402302 394 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 AL158825.1-201ENST00000414735 521 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 ZYG11AP1-201ENST00000430329 837 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 MTND4P2-201ENST00000507767 1203 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 AC091515.1-201ENST00000548110 679 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.19□□□□□ -1.74
TOP2AP11388 AC061975.8-201ENST00000587058 721 ntBASIC4.19□□□□□ -1.74
TOP2AP11388 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP2AP11388 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP2AP11388 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP2AP11388 AL591806.2-201ENST00000433122 173 ntBASIC4.18□□□□□ -1.74
TOP2AP11388 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.18□□□□□ -1.74
TOP2AP11388 AC026436.1-201ENST00000510537 270 ntBASIC4.18□□□□□ -1.74
TOP2AP11388 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TOP2AP11388 MIR5007-201ENST00000583098 95 ntBASIC4.18□□□□□ -1.74
TOP2AP11388 AC067747.1-201ENST00000608026 250 ntBASIC4.18□□□□□ -1.74
TOP2AP11388 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TOP2AP11388 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TOP2AP11388 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.17□□□□□ -1.74
TOP2AP11388 RNU6-76P-201ENST00000384060 104 ntBASIC4.17□□□□□ -1.74
TOP2AP11388 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 AL606490.7-201ENST00000433136 191 ntBASIC4.17□□□□□ -1.74
TOP2AP11388 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.17□□□□□ -1.74
TOP2AP11388 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.17□□□□□ -1.74
TOP2AP11388 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP2AP11388 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.17□□□□□ -1.74
TOP2AP11388 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TOP2AP11388 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP2AP11388 RNU2-6P-201ENST00000411404 190 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 AP001317.1-201ENST00000531194 960 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 AC025754.2-201ENST00000606491 432 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 AC007342.7-201ENST00000624610 2337 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TOP2AP11388 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TOP2AP11388 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
TOP2AP11388 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TOP2AP11388 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.16□□□□□ -1.74
TOP2AP11388 SNORA68.2-201ENST00000391263 128 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 AC013410.1-201ENST00000436223 1232 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 AC245517.2-201ENST00000442890 346 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 RNA5SP76-201ENST00000516277 87 ntBASIC4.16□□□□□ -1.74
TOP2AP11388 ZNF355P-201ENST00000427301 3216 ntBASIC4.15□□□□□ -1.74
TOP2AP11388 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
TOP2AP11388 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
TOP2AP11388 AC104454.1-201ENST00000421341 1401 ntBASIC4.15□□□□□ -1.74
TOP2AP11388 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TOP2AP11388 RPS15AP6-201ENST00000420703 385 ntBASIC4.15□□□□□ -1.75
TOP2AP11388 MTCO2P17-201ENST00000424336 677 ntBASIC4.15□□□□□ -1.75
TOP2AP11388 COX6CP2-201ENST00000444980 225 ntBASIC4.15□□□□□ -1.75
TOP2AP11388 RPL23AP11-201ENST00000475260 469 ntBASIC4.15□□□□□ -1.75
TOP2AP11388 RFPL1S-203ENST00000539579 330 ntBASIC4.15□□□□□ -1.75
TOP2AP11388 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TOP2AP11388 AC022031.1-201ENST00000585985 2593 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.14□□□□□ -1.75
TOP2AP11388 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP2AP11388 CUL1P1-201ENST00000509510 2425 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TOP2AP11388 AL591416.1-201ENST00000404015 867 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 ATG3P1-201ENST00000419507 911 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.14□□□□□ -1.75
TOP2AP11388 AC108210.2-201ENST00000503681 201 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 AC026464.5-201ENST00000562497 722 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.14□□□□□ -1.75
TOP2AP11388 AL136981.2-201ENST00000617319 734 ntBASIC4.14□□□□□ -1.75
TOP2AP11388 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TOP2AP11388 AL445437.1-201ENST00000623157 3087 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
TOP2AP11388 AL354710.1-201ENST00000453641 246 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 RPL23AP49-201ENST00000492925 468 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 AL024509.2-201ENST00000493462 493 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
TOP2AP11388 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.13□□□□□ -1.75
TOP2AP11388 PISRT1-201ENST00000626175 531 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
TOP2AP11388 AC093311.1-201ENST00000506586 2021 ntBASIC4.13□□□□□ -1.75
TOP2AP11388 RAD1P1-201ENST00000231383 813 ntBASIC4.12□□□□□ -1.75
TOP2AP11388 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
TOP2AP11388 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms