Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RETP07949 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RETP07949 AL353746.1-201ENST00000566293 6881 ntBASIC3.36□□□□□ -1.87
RETP07949 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RETP07949 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
RETP07949 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 EIF5P1-201ENST00000400019 1231 ntBASIC3.36□□□□□ -1.87
RETP07949 AL590290.1-201ENST00000405336 380 ntBASIC3.36□□□□□ -1.87
RETP07949 RNA5SP80-201ENST00000410475 111 ntBASIC3.36□□□□□ -1.87
RETP07949 LINC01347-201ENST00000417964 355 ntBASIC3.36□□□□□ -1.87
RETP07949 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 MORF4L1P7-201ENST00000426038 703 ntBASIC3.36□□□□□ -1.87
RETP07949 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
RETP07949 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
RETP07949 RPL7P59-201ENST00000447700 943 ntBASIC3.36□□□□□ -1.87
RETP07949 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.36□□□□□ -1.87
RETP07949 RN7SL594P-201ENST00000470590 287 ntBASIC3.36□□□□□ -1.87
RETP07949 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
RETP07949 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 AC021678.1-201ENST00000505195 936 ntBASIC3.36□□□□□ -1.87
RETP07949 APOOP4-201ENST00000513530 597 ntBASIC3.36□□□□□ -1.87
RETP07949 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.36□□□□□ -1.87
RETP07949 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
RETP07949 OR8K2P-201ENST00000524645 927 ntBASIC3.36□□□□□ -1.87
RETP07949 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.36□□□□□ -1.87
RETP07949 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 AL121603.1-201ENST00000553815 142 ntBASIC3.36□□□□□ -1.87
RETP07949 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.36□□□□□ -1.87
RETP07949 PCNAP1-202ENST00000595299 752 ntBASIC3.36□□□□□ -1.87
RETP07949 AC136601.2-201ENST00000604356 474 ntBASIC3.36□□□□□ -1.87
RETP07949 AC135178.6-201ENST00000605314 398 ntBASIC3.36□□□□□ -1.87
RETP07949 AC073657.2-201ENST00000605661 303 ntBASIC3.36□□□□□ -1.87
RETP07949 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
RETP07949 AC006213.5-201ENST00000619673 288 ntBASIC3.36□□□□□ -1.87
RETP07949 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RETP07949 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.36□□□□□ -1.87
RETP07949 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.36□□□□□ -1.87
RETP07949 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RETP07949 AC116096.1-201ENST00000566804 2314 ntBASIC3.36□□□□□ -1.87
RETP07949 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
RETP07949 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RETP07949 FAM35CP-201ENST00000554755 2470 ntBASIC3.35□□□□□ -1.87
RETP07949 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RETP07949 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RETP07949 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RETP07949 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RETP07949 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RETP07949 TAF9BP2-201ENST00000400856 499 ntBASIC3.35□□□□□ -1.87
RETP07949 MTATP6P31-201ENST00000406985 692 ntBASIC3.35□□□□□ -1.87
RETP07949 UBE2V1P15-201ENST00000407776 448 ntBASIC3.35□□□□□ -1.87
RETP07949 RNU2-6P-201ENST00000411404 190 ntBASIC3.35□□□□□ -1.87
RETP07949 AC007899.1-201ENST00000412776 775 ntBASIC3.35□□□□□ -1.87
RETP07949 MTND4P22-201ENST00000413116 1169 ntBASIC3.35□□□□□ -1.87
RETP07949 AL357078.2-201ENST00000416486 427 ntBASIC3.35□□□□□ -1.87
RETP07949 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
RETP07949 RPL35AP12-201ENST00000425362 338 ntBASIC3.35□□□□□ -1.87
RETP07949 MTND4P15-201ENST00000437913 1033 ntBASIC3.35□□□□□ -1.87
RETP07949 HSPE1P28-201ENST00000443139 211 ntBASIC3.35□□□□□ -1.87
RETP07949 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC3.35□□□□□ -1.87
RETP07949 RPL32P28-201ENST00000443577 397 ntBASIC3.35□□□□□ -1.87
RETP07949 ARL5AP2-201ENST00000444698 533 ntBASIC3.35□□□□□ -1.87
RETP07949 VN1R17P-201ENST00000472048 1090 ntBASIC3.35□□□□□ -1.87
RETP07949 AC104687.1-201ENST00000485829 412 ntBASIC3.35□□□□□ -1.87
RETP07949 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
RETP07949 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.35□□□□□ -1.87
RETP07949 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.35□□□□□ -1.87
RETP07949 OR4R3P-201ENST00000525084 838 ntBASIC3.35□□□□□ -1.87
RETP07949 POLR2KP1-201ENST00000553226 168 ntBASIC3.35□□□□□ -1.87
RETP07949 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.35□□□□□ -1.87
RETP07949 LINC00557-201ENST00000563184 1279 ntBASIC3.35□□□□□ -1.87
RETP07949 AC005951.1-201ENST00000576706 485 ntBASIC3.35□□□□□ -1.87
RETP07949 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.35□□□□□ -1.87
RETP07949 AC015849.2-201ENST00000605738 409 ntBASIC3.35□□□□□ -1.87
RETP07949 MIR1264-201ENST00000616374 69 ntBASIC3.35□□□□□ -1.87
RETP07949 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
RETP07949 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.35□□□□□ -1.87
RETP07949 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.35□□□□□ -1.87
RETP07949 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.35□□□□□ -1.87
RETP07949 MTND4P31-201ENST00000425607 1343 ntBASIC3.35□□□□□ -1.87
RETP07949 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.34□□□□□ -1.87
RETP07949 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.34□□□□□ -1.87
RETP07949 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RETP07949 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.34□□□□□ -1.87
RETP07949 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
RETP07949 RPS7P13-201ENST00000413955 498 ntBASIC3.34□□□□□ -1.87
RETP07949 AC234782.4-201ENST00000417646 1048 ntBASIC3.34□□□□□ -1.87
RETP07949 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
RETP07949 AC023128.2-201ENST00000420880 1223 ntBASIC3.34□□□□□ -1.87
RETP07949 AL590103.1-201ENST00000434488 307 ntBASIC3.34□□□□□ -1.87
RETP07949 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.34□□□□□ -1.87
RETP07949 AL513321.1-201ENST00000441175 761 ntBASIC3.34□□□□□ -1.87
RETP07949 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.34□□□□□ -1.87
RETP07949 AC069540.1-201ENST00000446320 988 ntBASIC3.34□□□□□ -1.87
RETP07949 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms