Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RNA5SP104-201ENST00000410989 118 ntBASIC4.15□□□□□ -1.75
RB1P06400 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 AL035410.1-201ENST00000427409 427 ntBASIC4.15□□□□□ -1.75
RB1P06400 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.15□□□□□ -1.75
RB1P06400 AL159987.2-201ENST00000432754 307 ntBASIC4.15□□□□□ -1.75
RB1P06400 ATP5F1P1-201ENST00000433775 569 ntBASIC4.15□□□□□ -1.75
RB1P06400 MTND2P20-201ENST00000440805 661 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.15□□□□□ -1.75
RB1P06400 MTCYBP11-201ENST00000447254 1109 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.15□□□□□ -1.75
RB1P06400 AC007967.1-201ENST00000455422 1159 ntBASIC4.15□□□□□ -1.75
RB1P06400 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.15□□□□□ -1.75
RB1P06400 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.15□□□□□ -1.75
RB1P06400 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.15□□□□□ -1.75
RB1P06400 OR5H5P-201ENST00000503164 928 ntBASIC4.15□□□□□ -1.75
RB1P06400 FABP5P12-201ENST00000515543 389 ntBASIC4.15□□□□□ -1.75
RB1P06400 IGKV2D-36-201ENST00000518643 226 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC087369.1-201ENST00000520775 996 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RB1P06400 AC010198.2-201ENST00000550612 259 ntBASIC4.15□□□□□ -1.75
RB1P06400 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.15□□□□□ -1.75
RB1P06400 AC022968.1-201ENST00000567372 442 ntBASIC4.15□□□□□ -1.75
RB1P06400 CYP4A43P-201ENST00000568156 121 ntBASIC4.15□□□□□ -1.75
RB1P06400 MTATP6P24-201ENST00000576835 677 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC009220.3-201ENST00000604318 586 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC080013.3-201ENST00000606839 578 ntBASIC4.15□□□□□ -1.75
RB1P06400 AP003392.5-201ENST00000607857 415 ntBASIC4.15□□□□□ -1.75
RB1P06400 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.15□□□□□ -1.75
RB1P06400 AC131235.4-201ENST00000609288 620 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.15□□□□□ -1.75
RB1P06400 AC097478.2-201ENST00000610572 514 ntBASIC4.15□□□□□ -1.75
RB1P06400 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC090116.1-201ENST00000615679 446 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC121761.2-201ENST00000617300 689 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC009318.4-201ENST00000620496 486 ntBASIC4.15□□□□□ -1.75
RB1P06400 AC011330.2-201ENST00000621680 635 ntBASIC4.15□□□□□ -1.75
RB1P06400 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RB1P06400 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RB1P06400 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RB1P06400 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RB1P06400 AC097504.1-201ENST00000515103 2415 ntBASIC4.15□□□□□ -1.75
RB1P06400 AL079305.1-201ENST00000623159 3008 ntBASIC4.15□□□□□ -1.75
RB1P06400 SEPT7P7-201ENST00000420492 1301 ntBASIC4.15□□□□□ -1.75
RB1P06400 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RB1P06400 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RB1P06400 MTND5P3-201ENST00000438536 1800 ntBASIC4.14□□□□□ -1.75
RB1P06400 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RB1P06400 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RB1P06400 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 SNORD3H-201ENST00000384486 214 ntBASIC4.14□□□□□ -1.75
RB1P06400 MIR218-2-201ENST00000385006 110 ntBASIC4.14□□□□□ -1.75
RB1P06400 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RB1P06400 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 SNORA3C-201ENST00000408792 125 ntBASIC4.14□□□□□ -1.75
RB1P06400 RPS24P7-201ENST00000416921 246 ntBASIC4.14□□□□□ -1.75
RB1P06400 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 RPL7P53-201ENST00000421245 739 ntBASIC4.14□□□□□ -1.75
RB1P06400 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 FGF7P5-201ENST00000441829 291 ntBASIC4.14□□□□□ -1.75
RB1P06400 ELOCP13-201ENST00000443934 329 ntBASIC4.14□□□□□ -1.75
RB1P06400 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 RPL12P26-201ENST00000452430 487 ntBASIC4.14□□□□□ -1.75
RB1P06400 NECAP1P2-201ENST00000455668 727 ntBASIC4.14□□□□□ -1.75
RB1P06400 AL133477.1-201ENST00000457472 514 ntBASIC4.14□□□□□ -1.75
RB1P06400 MTND1P16-201ENST00000465177 898 ntBASIC4.14□□□□□ -1.75
RB1P06400 PABPC1P3-201ENST00000469174 459 ntBASIC4.14□□□□□ -1.75
RB1P06400 HMGB1P28-201ENST00000507778 552 ntBASIC4.14□□□□□ -1.75
RB1P06400 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 Vault.1-201ENST00000516474 102 ntBASIC4.14□□□□□ -1.75
RB1P06400 RN7SKP287-201ENST00000516546 266 ntBASIC4.14□□□□□ -1.75
RB1P06400 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.14□□□□□ -1.75
RB1P06400 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RB1P06400 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.14□□□□□ -1.75
RB1P06400 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.14□□□□□ -1.75
RB1P06400 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.14□□□□□ -1.75
RB1P06400 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.14□□□□□ -1.75
RB1P06400 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.14□□□□□ -1.75
RB1P06400 VN1R92P-201ENST00000598511 928 ntBASIC4.14□□□□□ -1.75
RB1P06400 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.14□□□□□ -1.75
RB1P06400 AC093424.1-201ENST00000604999 338 ntBASIC4.14□□□□□ -1.75
RB1P06400 AC069304.2-201ENST00000605154 435 ntBASIC4.14□□□□□ -1.75
RB1P06400 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.14□□□□□ -1.75
RB1P06400 AC064801.1-201ENST00000612025 407 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms