Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 RPS27AP18-201ENST00000515536 459 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.93□□□□□ -1.94
COL4A1P02462 NF1P10-201ENST00000613227 742 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 AL160394.1-201ENST00000624765 724 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 MIR6733-201ENST00000635723 61 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.93□□□□□ -1.94
COL4A1P02462 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
COL4A1P02462 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
COL4A1P02462 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
COL4A1P02462 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A1P02462 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
COL4A1P02462 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 AL023284.1-201ENST00000403956 276 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 RN7SKP140-201ENST00000411196 284 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A1P02462 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.92□□□□□ -1.94
COL4A1P02462 AL603825.1-201ENST00000438481 80 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC104058.1-201ENST00000448028 297 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 RPL36AP33-201ENST00000450395 310 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC021269.2-201ENST00000532318 330 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 AP003499.2-201ENST00000624100 483 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 MIR1291-201ENST00000627649 87 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL4A1P02462 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
COL4A1P02462 CYCSP45-201ENST00000402289 315 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC013470.3-201ENST00000420252 1194 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 SRIP2-201ENST00000428470 166 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.92□□□□□ -1.94
COL4A1P02462 HMGB1P18-201ENST00000438801 619 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 snoU13.23-201ENST00000458863 104 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 RPL21P71-201ENST00000465598 459 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC126182.1-201ENST00000478134 357 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 RPL9P6-201ENST00000492764 598 ntBASIC2.92□□□□□ -1.94
COL4A1P02462 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
COL4A1P02462 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.92□□□□□ -1.94
COL4A1P02462 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A1P02462 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
COL4A1P02462 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
COL4A1P02462 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.91□□□□□ -1.94
COL4A1P02462 AC092079.1-201ENST00000558620 1985 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.91□□□□□ -1.94
COL4A1P02462 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
COL4A1P02462 EIF5P1-201ENST00000400019 1231 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 FAT1P1-201ENST00000406588 507 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 UBE2V2P4-201ENST00000447495 259 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 RPS20P22-201ENST00000473700 357 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.91□□□□□ -1.94
COL4A1P02462 LDHBP3-201ENST00000514909 822 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 Y_RNA.676-201ENST00000516393 96 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 RNU6-964P-201ENST00000516524 69 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
COL4A1P02462 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
COL4A1P02462 AC004825.2-201ENST00000616634 455 ntBASIC2.91□□□□□ -1.94
COL4A1P02462 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.9□□□□□ -1.94
COL4A1P02462 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A1P02462 AC134882.1-201ENST00000603738 1676 ntBASIC2.9□□□□□ -1.94
COL4A1P02462 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
COL4A1P02462 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.9□□□□□ -1.94
COL4A1P02462 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A1P02462 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A1P02462 AL390023.1-201ENST00000428836 262 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 MRPS33P4-201ENST00000434892 317 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 IFNA11P-201ENST00000446352 526 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 GAPDHP39-201ENST00000481866 979 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 POU5F1P7-201ENST00000508759 541 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 RNU6-991P-201ENST00000516168 107 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 YWHAZP1-201ENST00000556286 722 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A1P02462 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.9□□□□□ -1.95
COL4A1P02462 AP002967.1-201ENST00000624203 539 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.9□□□□□ -1.95
COL4A1P02462 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
COL4A1P02462 OR10AB1P-202ENST00000641219 1686 ntBASIC2.9□□□□□ -1.95
COL4A1P02462 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL4A1P02462 PHKBP1-201ENST00000450951 1951 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL4A1P02462 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
COL4A1P02462 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A1P02462 MIR1183-201ENST00000408856 89 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AL513175.2-201ENST00000422071 443 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AC096638.1-201ENST00000444678 216 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 COX6CP2-201ENST00000444980 225 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AC099063.2-201ENST00000446360 662 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.89□□□□□ -1.95
COL4A1P02462 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
COL4A1P02462 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A1P02462 AP001317.1-201ENST00000531194 960 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.89□□□□□ -1.95
COL4A1P02462 CKS1BP1-201ENST00000555221 240 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A1P02462 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL4A1P02462 OR5AQ1P-202ENST00000641257 1534 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.89□□□□□ -1.95
COL4A1P02462 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.89□□□□□ -1.95
COL4A1P02462 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms