Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC022031.1-201ENST00000585985 2593 ntBASIC3.14□□□□□ -1.91
COL1A1P02452 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL1A1P02452 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL1A1P02452 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL1A1P02452 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL1A1P02452 AL590290.1-201ENST00000405336 380 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 MTCO3P31-201ENST00000405526 789 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 OR2B8P-201ENST00000432841 938 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.13□□□□□ -1.91
COL1A1P02452 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.13□□□□□ -1.91
COL1A1P02452 WASF1P1-201ENST00000447560 1131 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 CLIC4P1-201ENST00000453177 535 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 AP000893.1-201ENST00000474462 794 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 POU5F1P7-201ENST00000508759 541 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 AC008837.1-201ENST00000511513 412 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.13□□□□□ -1.91
COL1A1P02452 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.13□□□□□ -1.91
COL1A1P02452 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.13□□□□□ -1.91
COL1A1P02452 AP000873.5-201ENST00000533906 236 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 OR8L1P-201ENST00000534005 955 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.13□□□□□ -1.91
COL1A1P02452 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.13□□□□□ -1.91
COL1A1P02452 AC022069.1-201ENST00000582910 658 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 AL158827.2-201ENST00000602494 330 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 AL691447.3-201ENST00000635020 330 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 PNPT1P2-201ENST00000456768 2050 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 MAPK10-362ENST00000641864 4484 ntBASIC3.13□□□□□ -1.91
COL1A1P02452 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
COL1A1P02452 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL1A1P02452 AL592437.2-201ENST00000421655 2434 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL1A1P02452 SNORA36C-201ENST00000384289 132 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 RNU6-146P-201ENST00000384602 108 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 GSTA12P-201ENST00000402398 508 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 RPS4XP7-201ENST00000406274 780 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AL135786.1-201ENST00000415892 214 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 RPLP0P7-201ENST00000416050 667 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.12□□□□□ -1.91
COL1A1P02452 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.12□□□□□ -1.91
COL1A1P02452 IFNA11P-201ENST00000446352 526 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AL035551.1-201ENST00000446931 348 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC104058.1-201ENST00000448028 297 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 NDUFS5P3-201ENST00000450668 321 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.12□□□□□ -1.91
COL1A1P02452 OR6K1P-201ENST00000456766 971 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 RN7SL297P-201ENST00000483161 293 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC132942.1-201ENST00000486753 483 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.12□□□□□ -1.91
COL1A1P02452 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.12□□□□□ -1.91
COL1A1P02452 RN7SKP31-201ENST00000516354 278 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AL845331.3-202ENST00000562856 261 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC010620.2-201ENST00000600135 313 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC069234.5-201ENST00000611056 416 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC093311.1-201ENST00000506586 2021 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC138915.3-201ENST00000562908 1389 ntBASIC3.12□□□□□ -1.91
COL1A1P02452 AC092881.1-201ENST00000638218 2733 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.11□□□□□ -1.91
COL1A1P02452 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
COL1A1P02452 ATP5F1P6-201ENST00000402768 767 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.11□□□□□ -1.91
COL1A1P02452 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.11□□□□□ -1.91
COL1A1P02452 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.11□□□□□ -1.91
COL1A1P02452 RPL7P10-201ENST00000417407 739 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 FCF1P1-201ENST00000432690 571 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.11□□□□□ -1.91
COL1A1P02452 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.11□□□□□ -1.91
COL1A1P02452 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.11□□□□□ -1.91
COL1A1P02452 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL1A1P02452 MTND2P17-201ENST00000550281 688 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.11□□□□□ -1.91
COL1A1P02452 AC107871.2-201ENST00000612894 502 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 AC000123.2-201ENST00000623124 461 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
COL1A1P02452 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL1A1P02452 MTCO1P9-201ENST00000505577 1534 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COL1A1P02452 AC114546.3-201ENST00000623582 1734 ntBASIC3.11□□□□□ -1.91
COL1A1P02452 AL133412.1-201ENST00000380194 2992 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.1□□□□□ -1.91
COL1A1P02452 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL1A1P02452 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
COL1A1P02452 AL512633.1-201ENST00000399931 655 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 AC012498.1-201ENST00000424037 437 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 UBE2D3P1-201ENST00000436669 444 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 RPS4XP6-201ENST00000477670 797 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.1□□□□□ -1.91
COL1A1P02452 AC025260.1-201ENST00000548858 430 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 AL391156.1-201ENST00000554965 554 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 MTND2P13-201ENST00000577438 1039 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC3.1□□□□□ -1.91
COL1A1P02452 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.1□□□□□ -1.91
COL1A1P02452 AC004825.2-201ENST00000616634 455 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 FRG1DP-201ENST00000635586 771 ntBASIC3.1□□□□□ -1.91
COL1A1P02452 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COL1A1P02452 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COL1A1P02452 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms