Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC131159.1-201ENST00000621854 213 ntBASIC3.96□□□□□ -1.78
LDLRP01130 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.96□□□□□ -1.78
LDLRP01130 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 AC026634.1-201ENST00000634369 198 ntBASIC3.96□□□□□ -1.78
LDLRP01130 MIR4278-201ENST00000636094 69 ntBASIC3.96□□□□□ -1.78
LDLRP01130 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.96□□□□□ -1.78
LDLRP01130 MIR1322-201ENST00000638013 71 ntBASIC3.96□□□□□ -1.78
LDLRP01130 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
LDLRP01130 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LDLRP01130 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LDLRP01130 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 AC104454.1-201ENST00000421341 1401 ntBASIC3.95□□□□□ -1.78
LDLRP01130 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AP000776.1-201ENST00000530032 1663 ntBASIC3.95□□□□□ -1.78
LDLRP01130 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 Y_RNA.51-201ENST00000362725 102 ntBASIC3.95□□□□□ -1.78
LDLRP01130 RNU6-623P-201ENST00000363143 105 ntBASIC3.95□□□□□ -1.78
LDLRP01130 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LDLRP01130 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.95□□□□□ -1.78
LDLRP01130 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 RNU6-648P-201ENST00000410190 107 ntBASIC3.95□□□□□ -1.78
LDLRP01130 RNU4-72P-201ENST00000410754 173 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 DLGAP5P1-201ENST00000430307 464 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
LDLRP01130 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 B3GNT2P1-201ENST00000434960 952 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC241584.1-201ENST00000438469 1241 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AL008629.1-201ENST00000438615 184 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 AL162151.2-201ENST00000448875 158 ntBASIC3.95□□□□□ -1.78
LDLRP01130 MTND2P19-201ENST00000449129 1012 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC013828.1-201ENST00000481845 158 ntBASIC3.95□□□□□ -1.78
LDLRP01130 MTND2P14-201ENST00000482139 351 ntBASIC3.95□□□□□ -1.78
LDLRP01130 OR4G11P-201ENST00000492842 939 ntBASIC3.95□□□□□ -1.78
LDLRP01130 RPS27AP13-201ENST00000498403 237 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 AC079395.1-201ENST00000510981 262 ntBASIC3.95□□□□□ -1.78
LDLRP01130 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 AC109445.1-201ENST00000512356 383 ntBASIC3.95□□□□□ -1.78
LDLRP01130 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 MTCO1P30-201ENST00000515244 580 ntBASIC3.95□□□□□ -1.78
LDLRP01130 SCARNA13-201ENST00000516672 275 ntBASIC3.95□□□□□ -1.78
LDLRP01130 RNU6-1261P-201ENST00000517194 104 ntBASIC3.95□□□□□ -1.78
LDLRP01130 MTND2P26-201ENST00000528255 1029 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 RFPL1S-203ENST00000539579 330 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC090502.2-201ENST00000549267 280 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.95□□□□□ -1.78
LDLRP01130 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.95□□□□□ -1.78
LDLRP01130 AC079171.1-201ENST00000568788 914 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC135628.1-201ENST00000568867 534 ntBASIC3.95□□□□□ -1.78
LDLRP01130 RN7SL600P-201ENST00000581811 299 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC068790.6-201ENST00000602558 258 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 MIR486-1-201ENST00000612171 68 ntBASIC3.95□□□□□ -1.78
LDLRP01130 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 AC090246.1-201ENST00000616499 426 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC039056.2-201ENST00000622261 511 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 AC140479.6-201ENST00000633535 357 ntBASIC3.95□□□□□ -1.78
LDLRP01130 AC103706.2-201ENST00000638080 240 ntBASIC3.95□□□□□ -1.78
LDLRP01130 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 AL031985.3-201ENST00000565390 2449 ntBASIC3.95□□□□□ -1.78
LDLRP01130 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 AL158163.1-201ENST00000603915 1649 ntBASIC3.95□□□□□ -1.78
LDLRP01130 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LDLRP01130 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.95□□□□□ -1.78
LDLRP01130 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LDLRP01130 FAM35DP-201ENST00000323387 2712 ntBASIC3.94□□□□□ -1.78
LDLRP01130 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.94□□□□□ -1.78
LDLRP01130 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LDLRP01130 AC095050.2-201ENST00000510748 1458 ntBASIC3.94□□□□□ -1.78
LDLRP01130 MIR331-201ENST00000362302 94 ntBASIC3.94□□□□□ -1.78
LDLRP01130 SNORA63.1-201ENST00000362493 131 ntBASIC3.94□□□□□ -1.78
LDLRP01130 RNU6-251P-201ENST00000363235 104 ntBASIC3.94□□□□□ -1.78
LDLRP01130 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 RNU6-657P-201ENST00000383904 107 ntBASIC3.94□□□□□ -1.78
LDLRP01130 RNU6-157P-201ENST00000383957 107 ntBASIC3.94□□□□□ -1.78
LDLRP01130 RNU6-921P-201ENST00000384361 107 ntBASIC3.94□□□□□ -1.78
LDLRP01130 MIR449B-201ENST00000384995 97 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 RNU2-21P-201ENST00000410368 188 ntBASIC3.94□□□□□ -1.78
LDLRP01130 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.94□□□□□ -1.78
LDLRP01130 RPS3AP44-201ENST00000425466 790 ntBASIC3.94□□□□□ -1.78
LDLRP01130 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms