Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 MTND3P22-201ENST00000510932 243 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 Y_RNA.704-201ENST00000516851 102 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.84□□□□□ -1.47
GRIN3BO60391 CYCSP28-201ENST00000534284 321 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC008127.2-201ENST00000549925 1075 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AC090312.1-201ENST00000580637 348 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 AL121655.1-201ENST00000605811 308 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 RNU6-87P-201ENST00000607561 108 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AL121757.2-201ENST00000611223 313 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC010133.1-201ENST00000615809 842 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 AC091905.1-201ENST00000624400 311 ntBASIC5.84□□□□□ -1.47
GRIN3BO60391 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
GRIN3BO60391 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
GRIN3BO60391 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
GRIN3BO60391 AC026523.2-201ENST00000625039 7739 ntBASIC5.84□□□□□ -1.48
GRIN3BO60391 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
GRIN3BO60391 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
GRIN3BO60391 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
GRIN3BO60391 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 RN7SKP186-201ENST00000365371 303 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RNA5SP283-201ENST00000365604 119 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 Y_RNA.481-201ENST00000384373 102 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 MIR649-201ENST00000384843 97 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.83□□□□□ -1.48
GRIN3BO60391 DHFRP6-201ENST00000401776 268 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RPS20P2-201ENST00000402520 389 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AL357515.1-201ENST00000402967 542 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RNU2-8P-201ENST00000410727 190 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.83□□□□□ -1.48
GRIN3BO60391 ZNF90P2-204ENST00000419323 1075 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.83□□□□□ -1.48
GRIN3BO60391 KCTD9P3-201ENST00000434597 1169 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 CALM1P1-201ENST00000442082 433 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC000111.2-201ENST00000448200 210 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC079168.2-201ENST00000453977 416 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC079382.1-201ENST00000493346 557 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC090453.1-201ENST00000495560 436 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RNF138P1-201ENST00000502765 546 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 IGBP1P4-201ENST00000503202 879 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC097486.1-201ENST00000515331 210 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RNU6-201P-201ENST00000517100 61 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AF235103.2-201ENST00000525753 346 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AP000827.1-201ENST00000527814 258 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.83□□□□□ -1.48
GRIN3BO60391 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 MAGOH2P-202ENST00000584384 429 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AL391646.1-201ENST00000603860 190 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AL009028.1-201ENST00000604895 802 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 AC006065.6-201ENST00000625201 545 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 AC010329.2-201ENST00000595195 2737 ntBASIC5.83□□□□□ -1.48
GRIN3BO60391 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GRIN3BO60391 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.83□□□□□ -1.48
GRIN3BO60391 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.82□□□□□ -1.48
GRIN3BO60391 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GRIN3BO60391 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GRIN3BO60391 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GRIN3BO60391 STX3-208ENST00000641815 3236 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 Y_RNA.160-201ENST00000363677 92 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 Y_RNA.409-201ENST00000383990 98 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 RNU6-483P-201ENST00000384088 108 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 RNU6-441P-201ENST00000384545 106 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 RPL7P25-201ENST00000404151 721 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 AL603766.1-201ENST00000407763 664 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 RNU6ATAC-201ENST00000408749 126 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.82□□□□□ -1.48
GRIN3BO60391 AMD1P2-201ENST00000412936 992 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.82□□□□□ -1.48
GRIN3BO60391 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.82□□□□□ -1.48
GRIN3BO60391 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.82□□□□□ -1.48
GRIN3BO60391 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.82□□□□□ -1.48
GRIN3BO60391 YME1L1P1-201ENST00000429435 297 ntBASIC5.82□□□□□ -1.48
GRIN3BO60391 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.82□□□□□ -1.48
GRIN3BO60391 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC5.82□□□□□ -1.48
GRIN3BO60391 RPS3AP12-201ENST00000443616 753 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms