Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.7□□□□□ -1.82
PRKNO60260 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.7□□□□□ -1.82
PRKNO60260 BNIP3P5-201ENST00000562290 498 ntBASIC3.7□□□□□ -1.82
PRKNO60260 SULT1C2P1-202ENST00000562418 459 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC022968.1-201ENST00000567372 442 ntBASIC3.7□□□□□ -1.82
PRKNO60260 MIR4504-201ENST00000577413 92 ntBASIC3.7□□□□□ -1.82
PRKNO60260 MIR4286-201ENST00000580651 93 ntBASIC3.7□□□□□ -1.82
PRKNO60260 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.7□□□□□ -1.82
PRKNO60260 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 VN1R92P-201ENST00000598511 928 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL606490.9-201ENST00000603331 271 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC083899.3-201ENST00000603413 594 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC024560.3-201ENST00000608482 349 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL359535.1-201ENST00000612100 1087 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL158063.1-201ENST00000615349 536 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AL356266.1-201ENST00000623311 483 ntBASIC3.7□□□□□ -1.82
PRKNO60260 AC231657.1-201ENST00000624313 397 ntBASIC3.7□□□□□ -1.82
PRKNO60260 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 ZNF37BP-203ENST00000452306 1352 ntBASIC3.7□□□□□ -1.82
PRKNO60260 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.7□□□□□ -1.82
PRKNO60260 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
PRKNO60260 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PRKNO60260 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKNO60260 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 AL603766.1-201ENST00000407763 664 ntBASIC3.69□□□□□ -1.82
PRKNO60260 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 AL138785.1-201ENST00000425821 331 ntBASIC3.69□□□□□ -1.82
PRKNO60260 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 MED14P1-201ENST00000430517 648 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC023347.2-201ENST00000433994 462 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC105402.2-201ENST00000438503 358 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC069285.2-201ENST00000440210 275 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKNO60260 AP000936.2-201ENST00000447151 681 ntBASIC3.69□□□□□ -1.82
PRKNO60260 RPL26P28-201ENST00000451325 435 ntBASIC3.69□□□□□ -1.82
PRKNO60260 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 KATNBL1P6-201ENST00000453433 915 ntBASIC3.69□□□□□ -1.82
PRKNO60260 FGF7P3-201ENST00000454645 303 ntBASIC3.69□□□□□ -1.82
PRKNO60260 PPIAP15-201ENST00000479662 484 ntBASIC3.69□□□□□ -1.82
PRKNO60260 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 SNX5P1-201ENST00000505757 1041 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC017037.1-201ENST00000508460 471 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC006499.6-201ENST00000511169 607 ntBASIC3.69□□□□□ -1.82
PRKNO60260 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.69□□□□□ -1.82
PRKNO60260 AC018797.3-201ENST00000513388 1241 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 AC106038.2-201ENST00000520706 568 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 AC239860.2-201ENST00000525886 270 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 HIGD1AP10-201ENST00000527837 282 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.69□□□□□ -1.82
PRKNO60260 YPEL5P3-201ENST00000547227 352 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.69□□□□□ -1.82
PRKNO60260 AL389895.1-201ENST00000554127 252 ntBASIC3.69□□□□□ -1.82
PRKNO60260 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKNO60260 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKNO60260 AC103987.3-201ENST00000582071 292 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 AC020914.6-201ENST00000594327 272 ntBASIC3.69□□□□□ -1.82
PRKNO60260 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.69□□□□□ -1.82
PRKNO60260 AL020997.2-201ENST00000602607 184 ntBASIC3.69□□□□□ -1.82
PRKNO60260 MTCYBP22-201ENST00000603788 447 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC104662.1-201ENST00000604448 511 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC012557.2-201ENST00000605919 418 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AL391497.1-201ENST00000608671 547 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AC243773.3-201ENST00000613270 256 ntBASIC3.69□□□□□ -1.82
PRKNO60260 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.69□□□□□ -1.82
PRKNO60260 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
PRKNO60260 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PRKNO60260 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.69□□□□□ -1.82
PRKNO60260 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.69□□□□□ -1.82
PRKNO60260 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.68□□□□□ -1.82
PRKNO60260 AC117529.2-201ENST00000512159 2068 ntBASIC3.68□□□□□ -1.82
PRKNO60260 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.68□□□□□ -1.82
PRKNO60260 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.68□□□□□ -1.82
PRKNO60260 AL672167.1-206ENST00000356293 943 ntBASIC3.68□□□□□ -1.82
PRKNO60260 RNU1-108P-201ENST00000362556 161 ntBASIC3.68□□□□□ -1.82
PRKNO60260 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PRKNO60260 RPL32P23-201ENST00000397237 405 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms