Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AC080013.4-201ENST00000607624 649 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC091965.4-201ENST00000607691 587 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 OR6R2P-201ENST00000609216 300 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC012409.3-201ENST00000611343 981 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AL592295.2-201ENST00000612578 206 ntBASIC4.51□□□□□ -1.69
PROM1O43490 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PROM1O43490 AC104010.1-201ENST00000616889 150 ntBASIC4.51□□□□□ -1.69
PROM1O43490 LINC00901.1-201ENST00000617252 152 ntBASIC4.51□□□□□ -1.69
PROM1O43490 AC068880.5-201ENST00000624331 290 ntBASIC4.51□□□□□ -1.69
PROM1O43490 MIR3688-2-201ENST00000636963 87 ntBASIC4.51□□□□□ -1.69
PROM1O43490 OR51H2P-202ENST00000641424 3046 ntBASIC4.51□□□□□ -1.69
PROM1O43490 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 AC027290.2-201ENST00000623210 18662 ntBASIC4.51□□□□□ -1.69
PROM1O43490 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
PROM1O43490 AL136964.1-201ENST00000622038 2990 ntBASIC4.51□□□□□ -1.69
PROM1O43490 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 AC006378.2-201ENST00000623178 2476 ntBASIC4.51□□□□□ -1.69
PROM1O43490 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.51□□□□□ -1.69
PROM1O43490 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.51□□□□□ -1.69
PROM1O43490 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
PROM1O43490 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.5□□□□□ -1.69
PROM1O43490 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PROM1O43490 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PROM1O43490 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 RNU6-694P-201ENST00000364071 147 ntBASIC4.5□□□□□ -1.69
PROM1O43490 Y_RNA.450-201ENST00000384198 113 ntBASIC4.5□□□□□ -1.69
PROM1O43490 CIR1P3-201ENST00000405137 479 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RPS16P5-201ENST00000406501 404 ntBASIC4.5□□□□□ -1.69
PROM1O43490 CCNG1P1-201ENST00000406783 885 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RNA5SP113-201ENST00000410486 84 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC009237.10-201ENST00000414112 510 ntBASIC4.5□□□□□ -1.69
PROM1O43490 BX295541.1-201ENST00000417774 250 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AL109913.1-201ENST00000421173 514 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC009480.2-201ENST00000422916 432 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.5□□□□□ -1.69
PROM1O43490 DNAJC19P7-201ENST00000428811 344 ntBASIC4.5□□□□□ -1.69
PROM1O43490 OR2B7P-201ENST00000429302 934 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 AC109583.1-201ENST00000432156 268 ntBASIC4.5□□□□□ -1.69
PROM1O43490 NRBF2P3-201ENST00000432731 865 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC000111.3-201ENST00000433478 193 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AL451074.3-201ENST00000437709 472 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.5□□□□□ -1.69
PROM1O43490 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.5□□□□□ -1.69
PROM1O43490 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.5□□□□□ -1.69
PROM1O43490 AC013267.1-201ENST00000458227 267 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RNU7-136P-201ENST00000458819 69 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC063943.1-201ENST00000465434 453 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RPS15AP17-201ENST00000470598 390 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC068587.1-201ENST00000483613 781 ntBASIC4.5□□□□□ -1.69
PROM1O43490 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PROM1O43490 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 SCARNA22-201ENST00000503991 125 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.5□□□□□ -1.69
PROM1O43490 AC091868.1-201ENST00000508746 304 ntBASIC4.5□□□□□ -1.69
PROM1O43490 RNU6-528P-201ENST00000516926 100 ntBASIC4.5□□□□□ -1.69
PROM1O43490 MTCO2P4-201ENST00000517968 247 ntBASIC4.5□□□□□ -1.69
PROM1O43490 SOD1P3-201ENST00000518682 454 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AP000790.1-201ENST00000528891 737 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.5□□□□□ -1.69
PROM1O43490 AC074050.1-201ENST00000563247 211 ntBASIC4.5□□□□□ -1.69
PROM1O43490 MIR4637-201ENST00000582405 84 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC006504.3-201ENST00000586818 523 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC092954.2-201ENST00000609103 430 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC025253.1-201ENST00000613623 543 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC063943.3-201ENST00000615562 356 ntBASIC4.5□□□□□ -1.69
PROM1O43490 AC022140.2-201ENST00000623500 188 ntBASIC4.5□□□□□ -1.69
PROM1O43490 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PROM1O43490 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
PROM1O43490 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.5□□□□□ -1.69
PROM1O43490 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.49□□□□□ -1.69
PROM1O43490 AL592182.3-201ENST00000642132 3304 ntBASIC4.49□□□□□ -1.69
PROM1O43490 OR11H5P-202ENST00000641612 1325 ntBASIC4.49□□□□□ -1.69
PROM1O43490 AL445487.1-201ENST00000415694 1580 ntBASIC4.49□□□□□ -1.69
PROM1O43490 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PROM1O43490 AP002907.1-201ENST00000606361 1430 ntBASIC4.49□□□□□ -1.69
PROM1O43490 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PROM1O43490 OR11H4-201ENST00000315409 1082 ntBASIC4.49□□□□□ -1.69
PROM1O43490 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PROM1O43490 RNA5SP191-201ENST00000362585 102 ntBASIC4.49□□□□□ -1.69
PROM1O43490 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
PROM1O43490 RNU6-114P-201ENST00000384704 105 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 152.6 ms