Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 AC007687.1-201ENST00000602704 304 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AL121992.2-201ENST00000606262 256 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 uc_338.5-201ENST00000611839 155 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC093913.1-201ENST00000614178 329 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC002550.2-201ENST00000621246 394 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 RMST_7.1-201ENST00000621935 268 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 AC091925.2-201ENST00000625059 256 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
HOXA3O43365 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA3O43365 OR4F13P-202ENST00000560066 2054 ntBASIC4.34□□□□□ -1.71
HOXA3O43365 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.34□□□□□ -1.71
HOXA3O43365 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA3O43365 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
HOXA3O43365 OR55B1P-203ENST00000641518 2602 ntBASIC4.34□□□□□ -1.72
HOXA3O43365 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.34□□□□□ -1.72
HOXA3O43365 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HOXA3O43365 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HOXA3O43365 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 AL353796.1-201ENST00000561542 3241 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 OR9K1P-202ENST00000641111 3217 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA3O43365 AC114947.2-201ENST00000565748 2125 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 ASNSP3-201ENST00000451989 1306 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA3O43365 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA3O43365 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA3O43365 RNA5SP305-201ENST00000362665 119 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HOXA3O43365 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 RNU6-1227P-201ENST00000383981 107 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR585-201ENST00000384887 94 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR454-201ENST00000390180 115 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 HSPA8P15-201ENST00000401676 786 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AL133270.1-201ENST00000402635 279 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 OR4K12P-201ENST00000406538 961 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR1302-11-201ENST00000408051 138 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR1302-9-201ENST00000408365 138 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR1302-10-201ENST00000408734 138 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RNU6-1148P-201ENST00000410992 104 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RN7SKP126-201ENST00000411143 300 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MTND3P8-201ENST00000412909 339 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC093162.1-201ENST00000419682 124 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RPL12P34-201ENST00000424532 479 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC005534.2-201ENST00000431047 433 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RPL34P6-201ENST00000432390 345 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 NPM1P18-201ENST00000434232 732 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MTATP6P16-201ENST00000434543 526 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 Z95327.1-201ENST00000446082 482 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC073850.1-201ENST00000449243 255 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC006480.1-201ENST00000449887 378 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MTND3P16-201ENST00000452205 344 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC087385.1-201ENST00000475062 312 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC126389.1-201ENST00000477436 290 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RPL5P22-201ENST00000480199 884 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 SNORA19.2-201ENST00000516013 114 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RNU6-27P-201ENST00000516146 107 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 RNU6-277P-201ENST00000516272 106 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AP004607.2-201ENST00000533949 322 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 BNIP3P6-201ENST00000549284 499 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.33□□□□□ -1.72
HOXA3O43365 MIR4646-201ENST00000580775 63 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.33□□□□□ -1.72
HOXA3O43365 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.33□□□□□ -1.72
HOXA3O43365 AC006116.3-201ENST00000592968 361 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC010591.1-201ENST00000603941 649 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 MIR1302-2-201ENST00000607096 138 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC130324.3-201ENST00000614165 542 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AC244100.1-202ENST00000621554 382 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AL160413.1-201ENST00000622780 310 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 AP002799.1-201ENST00000623552 423 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 TPTEP1-208ENST00000636884 213 ntBASIC4.33□□□□□ -1.72
HOXA3O43365 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms