Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-354P-201ENST00000383862 107 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-629P-201ENST00000384061 103 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-1181P-201ENST00000384191 106 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-610P-201ENST00000384264 107 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-55P-201ENST00000411092 107 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 RNU6-954P-201ENST00000411355 107 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 AC007390.1-201ENST00000415722 356 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 LIPT1P1-201ENST00000415870 1186 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN3O15551 AL158156.1-201ENST00000422509 473 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN3O15551 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN3O15551 ELOCP13-201ENST00000443934 329 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN3O15551 NDUFA5P7-201ENST00000452914 242 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 RPS4XP13-201ENST00000483219 789 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 AL358832.1-201ENST00000497800 389 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 HMGB3P15-201ENST00000507326 574 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN3O15551 AL136520.1-202ENST00000555494 763 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.66□□□□□ -1.82
CLDN3O15551 AC090116.1-201ENST00000615679 446 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 AL356321.1-201ENST00000621360 228 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN3O15551 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN3O15551 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.66□□□□□ -1.82
CLDN3O15551 AL121594.5-201ENST00000631724 573 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CLDN3O15551 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.66□□□□□ -1.82
CLDN3O15551 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CLDN3O15551 AC017071.1-201ENST00000564407 2204 ntBASIC3.66□□□□□ -1.82
CLDN3O15551 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CLDN3O15551 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CLDN3O15551 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN3O15551 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLDN3O15551 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN3O15551 OR1L1-202ENST00000373686 1083 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RNU6-339P-201ENST00000384310 107 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RNA5SP56-201ENST00000410277 118 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 HMGN1P24-201ENST00000412282 298 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 HSFY1P1-201ENST00000423928 1178 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN3O15551 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN3O15551 B3GNT2P1-201ENST00000434960 952 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 AL662791.1-201ENST00000441992 928 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.65□□□□□ -1.83
CLDN3O15551 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 snoU13.3-201ENST00000459441 104 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RN7SL601P-201ENST00000471221 293 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 VN1R17P-201ENST00000472048 1090 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 MIR2276-201ENST00000516886 89 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 RN7SKP289-201ENST00000517244 295 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 AC109635.4-202ENST00000531666 412 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 MTND5P21-201ENST00000531961 522 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LSM6P2-201ENST00000552208 177 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC015917.1-201ENST00000579654 510 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 AC011468.4-201ENST00000603942 409 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.65□□□□□ -1.83
CLDN3O15551 AL159169.3-201ENST00000608871 561 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN3O15551 AC078880.5-201ENST00000617845 421 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 XIST_intron.1-201ENST00000619444 68 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 PWAR6-201ENST00000552334 4618 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 AC117529.2-201ENST00000512159 2068 ntBASIC3.65□□□□□ -1.83
CLDN3O15551 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN3O15551 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLDN3O15551 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CLDN3O15551 AC091152.2-201ENST00000591628 2569 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 MTND5P1-201ENST00000445440 1375 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 RNU6-353P-201ENST00000364266 108 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 TMSB4XP8-201ENST00000402089 135 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 MTCO2P31-201ENST00000402702 684 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 AL583834.1-201ENST00000406943 343 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLDN3O15551 TMSB4XP6-201ENST00000415187 135 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.64□□□□□ -1.83
CLDN3O15551 AL356968.1-201ENST00000416622 474 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 TMSB4XP1-201ENST00000424567 135 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 RPL23AP82-202ENST00000427528 469 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 AC006946.1-201ENST00000429106 328 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLDN3O15551 AL050341.1-201ENST00000447743 313 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 RPS4XP2-201ENST00000458402 793 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 AC010401.1-201ENST00000463867 348 ntBASIC3.64□□□□□ -1.83
CLDN3O15551 CENPBD1P1-201ENST00000464061 469 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms