Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AL049693.1-201ENST00000402760 611 ntBASIC3.8□□□□□ -1.8
TO15178 AL356131.1-201ENST00000405826 414 ntBASIC3.8□□□□□ -1.8
TO15178 JKAMPP1-201ENST00000413804 919 ntBASIC3.8□□□□□ -1.8
TO15178 AC098592.1-201ENST00000419352 333 ntBASIC3.8□□□□□ -1.8
TO15178 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
TO15178 AL049610.1-201ENST00000423374 372 ntBASIC3.8□□□□□ -1.8
TO15178 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 ELOCP18-201ENST00000434209 337 ntBASIC3.8□□□□□ -1.8
TO15178 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.8□□□□□ -1.8
TO15178 CYCSP43-201ENST00000438233 310 ntBASIC3.8□□□□□ -1.8
TO15178 AC239367.2-201ENST00000447309 705 ntBASIC3.8□□□□□ -1.8
TO15178 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 CFTRP1-201ENST00000456646 183 ntBASIC3.8□□□□□ -1.8
TO15178 AC026410.2-201ENST00000460281 156 ntBASIC3.8□□□□□ -1.8
TO15178 RPL38P1-201ENST00000460914 211 ntBASIC3.8□□□□□ -1.8
TO15178 RPL7P19-201ENST00000469948 618 ntBASIC3.8□□□□□ -1.8
TO15178 LINC00888-204ENST00000487386 421 ntBASIC3.8□□□□□ -1.8
TO15178 RPS3AP22-201ENST00000488297 769 ntBASIC3.8□□□□□ -1.8
TO15178 NIPA2P2-201ENST00000496376 1083 ntBASIC3.8□□□□□ -1.8
TO15178 AC108078.3-201ENST00000502633 489 ntBASIC3.8□□□□□ -1.8
TO15178 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 RNU6-1129P-201ENST00000515964 104 ntBASIC3.8□□□□□ -1.8
TO15178 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.8□□□□□ -1.8
TO15178 DEFB131D-201ENST00000526803 184 ntBASIC3.8□□□□□ -1.8
TO15178 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TO15178 AL133457.1-201ENST00000564251 987 ntBASIC3.8□□□□□ -1.8
TO15178 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.8□□□□□ -1.8
TO15178 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 LARP7P2-201ENST00000575306 125 ntBASIC3.8□□□□□ -1.8
TO15178 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 SNRPGP15-201ENST00000600149 222 ntBASIC3.8□□□□□ -1.8
TO15178 AL353778.1-201ENST00000603149 408 ntBASIC3.8□□□□□ -1.8
TO15178 RPL23AP92-201ENST00000603609 255 ntBASIC3.8□□□□□ -1.8
TO15178 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.8□□□□□ -1.8
TO15178 AC090116.1-201ENST00000615679 446 ntBASIC3.8□□□□□ -1.8
TO15178 AC233309.1-201ENST00000619522 751 ntBASIC3.8□□□□□ -1.8
TO15178 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.8□□□□□ -1.8
TO15178 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.8□□□□□ -1.8
TO15178 MTND2P41-201ENST00000637599 773 ntBASIC3.8□□□□□ -1.8
TO15178 MTND5P24-201ENST00000438892 1767 ntBASIC3.8□□□□□ -1.8
TO15178 MAPK10-253ENST00000641010 4072 ntBASIC3.8□□□□□ -1.8
TO15178 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
TO15178 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TO15178 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TO15178 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.8□□□□□ -1.8
TO15178 MTCO1P23-201ENST00000415223 1526 ntBASIC3.8□□□□□ -1.8
TO15178 FAM35DP-201ENST00000323387 2712 ntBASIC3.79□□□□□ -1.8
TO15178 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.79□□□□□ -1.8
TO15178 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.79□□□□□ -1.8
TO15178 RNU6-374P-201ENST00000364146 108 ntBASIC3.79□□□□□ -1.8
TO15178 SNORD82-201ENST00000365530 70 ntBASIC3.79□□□□□ -1.8
TO15178 RNU6-730P-201ENST00000383954 104 ntBASIC3.79□□□□□ -1.8
TO15178 SNORA37-201ENST00000384504 129 ntBASIC3.79□□□□□ -1.8
TO15178 RNY3P9-201ENST00000384727 106 ntBASIC3.79□□□□□ -1.8
TO15178 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
TO15178 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.79□□□□□ -1.8
TO15178 MTCYBP38-201ENST00000417160 1123 ntBASIC3.79□□□□□ -1.8
TO15178 AL022400.1-201ENST00000423946 935 ntBASIC3.79□□□□□ -1.8
TO15178 MTND4P20-201ENST00000424125 869 ntBASIC3.79□□□□□ -1.8
TO15178 RSL24D1P6-201ENST00000426934 401 ntBASIC3.79□□□□□ -1.8
TO15178 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.79□□□□□ -1.8
TO15178 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.79□□□□□ -1.8
TO15178 USP9YP34-201ENST00000453983 808 ntBASIC3.79□□□□□ -1.8
TO15178 USP9YP10-201ENST00000454868 628 ntBASIC3.79□□□□□ -1.8
TO15178 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 AC097493.1-201ENST00000463958 372 ntBASIC3.79□□□□□ -1.8
TO15178 RN7SL385P-201ENST00000468873 276 ntBASIC3.79□□□□□ -1.8
TO15178 RPL31P13-201ENST00000484151 370 ntBASIC3.79□□□□□ -1.8
TO15178 RN7SL271P-201ENST00000487601 295 ntBASIC3.79□□□□□ -1.8
TO15178 RPL29P14-201ENST00000495837 428 ntBASIC3.79□□□□□ -1.8
TO15178 AC147055.4-201ENST00000504399 745 ntBASIC3.79□□□□□ -1.8
TO15178 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 AC006499.2-201ENST00000513470 337 ntBASIC3.79□□□□□ -1.8
TO15178 SNORA31.9-201ENST00000516429 84 ntBASIC3.79□□□□□ -1.8
TO15178 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
TO15178 AC104986.1-201ENST00000517978 436 ntBASIC3.79□□□□□ -1.8
TO15178 IGKV2D-36-201ENST00000518643 226 ntBASIC3.79□□□□□ -1.8
TO15178 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.79□□□□□ -1.8
TO15178 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.79□□□□□ -1.8
TO15178 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
TO15178 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
TO15178 AC141257.3-201ENST00000572906 215 ntBASIC3.79□□□□□ -1.8
TO15178 MIR5684-201ENST00000585074 65 ntBASIC3.79□□□□□ -1.8
TO15178 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.79□□□□□ -1.8
TO15178 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TO15178 AC018638.7-201ENST00000605836 1114 ntBASIC3.79□□□□□ -1.8
TO15178 AC080013.4-201ENST00000607624 649 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms