Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.82□□□□□ -1.64
CUX2O14529 HMGN1P18-201ENST00000457642 277 ntBASIC4.82□□□□□ -1.64
CUX2O14529 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.82□□□□□ -1.64
CUX2O14529 CYCSP20-201ENST00000473154 315 ntBASIC4.82□□□□□ -1.64
CUX2O14529 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
CUX2O14529 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.82□□□□□ -1.64
CUX2O14529 AC022509.4-201ENST00000621404 572 ntBASIC4.82□□□□□ -1.64
CUX2O14529 AC002543.1-201ENST00000299783 1954 ntBASIC4.82□□□□□ -1.64
CUX2O14529 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CUX2O14529 NSRP1P1-201ENST00000444067 1693 ntBASIC4.82□□□□□ -1.64
CUX2O14529 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CUX2O14529 RNU6-670P-201ENST00000364312 104 ntBASIC4.81□□□□□ -1.64
CUX2O14529 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.81□□□□□ -1.64
CUX2O14529 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.81□□□□□ -1.64
CUX2O14529 HMGB1P51-201ENST00000605166 638 ntBASIC4.81□□□□□ -1.64
CUX2O14529 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.81□□□□□ -1.64
CUX2O14529 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CUX2O14529 AC093775.1-201ENST00000624154 1868 ntBASIC4.81□□□□□ -1.64
CUX2O14529 RPL23AP48-201ENST00000406913 488 ntBASIC4.81□□□□□ -1.64
CUX2O14529 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.81□□□□□ -1.64
CUX2O14529 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.81□□□□□ -1.64
CUX2O14529 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.81□□□□□ -1.64
CUX2O14529 IGKV2-36-201ENST00000519999 223 ntBASIC4.81□□□□□ -1.64
CUX2O14529 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CUX2O14529 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.81□□□□□ -1.64
CUX2O14529 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.81□□□□□ -1.64
CUX2O14529 AP000867.2-201ENST00000532468 320 ntBASIC4.81□□□□□ -1.64
CUX2O14529 MTATP6P25-201ENST00000574491 261 ntBASIC4.81□□□□□ -1.64
CUX2O14529 NRBF2P1-201ENST00000587407 859 ntBASIC4.81□□□□□ -1.64
CUX2O14529 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.81□□□□□ -1.64
CUX2O14529 AC078899.5-201ENST00000612475 178 ntBASIC4.81□□□□□ -1.64
CUX2O14529 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CUX2O14529 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CUX2O14529 OR52B1P-201ENST00000316506 909 ntBASIC4.8□□□□□ -1.64
CUX2O14529 DHFRP5-201ENST00000406944 564 ntBASIC4.8□□□□□ -1.64
CUX2O14529 ARL5AP3-201ENST00000439327 386 ntBASIC4.8□□□□□ -1.64
CUX2O14529 RPL7P52-201ENST00000449200 742 ntBASIC4.8□□□□□ -1.64
CUX2O14529 AC008280.2-201ENST00000455473 307 ntBASIC4.8□□□□□ -1.64
CUX2O14529 LARP7P4-201ENST00000481075 878 ntBASIC4.8□□□□□ -1.64
CUX2O14529 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.8□□□□□ -1.64
CUX2O14529 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.8□□□□□ -1.64
CUX2O14529 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.8□□□□□ -1.64
CUX2O14529 SNORA31.21-201ENST00000517180 77 ntBASIC4.8□□□□□ -1.64
CUX2O14529 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.8□□□□□ -1.64
CUX2O14529 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.8□□□□□ -1.64
CUX2O14529 RANP3-201ENST00000530970 276 ntBASIC4.8□□□□□ -1.64
CUX2O14529 MIR1273D-201ENST00000577266 86 ntBASIC4.8□□□□□ -1.64
CUX2O14529 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.79□□□□□ -1.64
CUX2O14529 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CUX2O14529 MTND5P24-201ENST00000438892 1767 ntBASIC4.79□□□□□ -1.64
CUX2O14529 AC093908.1-201ENST00000623125 8092 ntBASIC4.79□□□□□ -1.64
CUX2O14529 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.79□□□□□ -1.64
CUX2O14529 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CUX2O14529 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.79□□□□□ -1.64
CUX2O14529 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC4.79□□□□□ -1.64
CUX2O14529 RPL29P29-201ENST00000448725 423 ntBASIC4.79□□□□□ -1.64
CUX2O14529 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.79□□□□□ -1.64
CUX2O14529 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.79□□□□□ -1.64
CUX2O14529 AC092851.1-201ENST00000535964 478 ntBASIC4.79□□□□□ -1.64
CUX2O14529 AC019080.5-201ENST00000624891 757 ntBASIC4.79□□□□□ -1.64
CUX2O14529 AC092159.4-201ENST00000624944 550 ntBASIC4.79□□□□□ -1.64
CUX2O14529 AC119674.1-220ENST00000641502 1048 ntBASIC4.79□□□□□ -1.64
CUX2O14529 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CUX2O14529 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUX2O14529 AC022022.1-201ENST00000430304 178 ntBASIC4.78□□□□□ -1.64
CUX2O14529 HMGB1P15-201ENST00000453854 435 ntBASIC4.78□□□□□ -1.64
CUX2O14529 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.78□□□□□ -1.64
CUX2O14529 RNU6-751P-201ENST00000516382 101 ntBASIC4.78□□□□□ -1.64
CUX2O14529 AC007954.1-201ENST00000554198 494 ntBASIC4.78□□□□□ -1.64
CUX2O14529 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CUX2O14529 AC007336.1-201ENST00000576365 3828 ntBASIC4.78□□□□□ -1.64
CUX2O14529 AC022069.1-201ENST00000582910 658 ntBASIC4.78□□□□□ -1.64
CUX2O14529 AC084373.1-201ENST00000603311 235 ntBASIC4.78□□□□□ -1.64
CUX2O14529 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC4.78□□□□□ -1.64
CUX2O14529 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.77□□□□□ -1.65
CUX2O14529 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.77□□□□□ -1.65
CUX2O14529 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.77□□□□□ -1.65
CUX2O14529 MTCO1P57-201ENST00000432182 261 ntBASIC4.77□□□□□ -1.65
CUX2O14529 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CUX2O14529 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.77□□□□□ -1.65
CUX2O14529 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.77□□□□□ -1.65
CUX2O14529 AC096725.1-201ENST00000514266 313 ntBASIC4.77□□□□□ -1.65
CUX2O14529 RN7SKP82-201ENST00000516786 223 ntBASIC4.77□□□□□ -1.65
CUX2O14529 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CUX2O14529 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.77□□□□□ -1.65
CUX2O14529 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CUX2O14529 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CUX2O14529 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CUX2O14529 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CUX2O14529 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CUX2O14529 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CUX2O14529 SNORD56.3-201ENST00000363507 71 ntBASIC4.76□□□□□ -1.65
CUX2O14529 MIR7-1-201ENST00000384871 110 ntBASIC4.76□□□□□ -1.65
CUX2O14529 MIR518E-201ENST00000385252 88 ntBASIC4.76□□□□□ -1.65
CUX2O14529 MORF4L1P6-201ENST00000418771 268 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms