Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPL23AP33-201ENST00000442301 452 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM38O00635 FDX1P2-201ENST00000450769 375 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 RPL7P1-201ENST00000468161 747 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 RPL7P9-201ENST00000468715 747 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC104763.1-201ENST00000475274 360 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 RPL9P33-201ENST00000484311 566 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC090453.1-201ENST00000495560 436 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 TMEM251P1-201ENST00000503717 318 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
TRIM38O00635 AC007016.1-201ENST00000512110 244 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC005798.1-201ENST00000513715 387 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM38O00635 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.55□□□□□ -1.68
TRIM38O00635 AC025588.3-201ENST00000604182 274 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 AC025253.1-201ENST00000613623 543 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 AC009878.1-201ENST00000621819 340 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AF246928.1-201ENST00000623768 87 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 AC079228.1-201ENST00000624774 1049 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM38O00635 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.55□□□□□ -1.68
TRIM38O00635 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM38O00635 AC090337.1-201ENST00000579651 2074 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 NUP58P1-201ENST00000502546 1738 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TRIM38O00635 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.55□□□□□ -1.68
TRIM38O00635 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.55□□□□□ -1.68
TRIM38O00635 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM38O00635 AL136964.1-201ENST00000622038 2990 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
TRIM38O00635 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM38O00635 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC021146.4-201ENST00000309229 279 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 RNA5SP515-201ENST00000364570 118 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
TRIM38O00635 RNU6-339P-201ENST00000384310 107 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AL590762.2-201ENST00000395798 571 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 RPL17P36-201ENST00000420302 549 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 MTCYBP24-201ENST00000420387 1106 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC012065.2-201ENST00000421295 375 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 MTCO2P34-201ENST00000421994 607 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 RPL7AP25-201ENST00000423357 805 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TRIM38O00635 ZNF863P-201ENST00000426746 417 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 RPS27AP12-201ENST00000429552 465 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AL590103.1-201ENST00000434488 307 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 SNRPEP7-201ENST00000438350 220 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AL592447.1-201ENST00000447592 540 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 RPL23AP24-201ENST00000458203 385 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 PLGLA-201ENST00000465668 449 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM38O00635 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 HMGB3P13-201ENST00000511263 607 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM38O00635 Y_RNA.695-201ENST00000516715 107 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AL139174.1-201ENST00000531489 886 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC100770.1-201ENST00000532310 322 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC087883.1-201ENST00000551882 391 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC007954.1-201ENST00000554198 494 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM38O00635 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.54□□□□□ -1.68
TRIM38O00635 MAGOH2P-202ENST00000584384 429 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 MTCYBP22-201ENST00000603788 447 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC024560.3-201ENST00000608482 349 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 SNX18P1Y-201ENST00000616231 511 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC009509.4-201ENST00000619202 509 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AP005019.3-201ENST00000620418 560 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AC104985.2-201ENST00000620598 500 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 MIR7154-201ENST00000620673 73 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AL356121.2-201ENST00000624715 780 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 FP325313.1-201ENST00000638228 703 ntBASIC4.54□□□□□ -1.68
TRIM38O00635 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.54□□□□□ -1.68
TRIM38O00635 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms