Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC090425.1-201ENST00000610007 140 ntBASIC5.69□□□□□ -1.5
SOX1O00570 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.69□□□□□ -1.5
SOX1O00570 AC087588.2-201ENST00000617667 426 ntBASIC5.69□□□□□ -1.5
SOX1O00570 AC119674.1-207ENST00000641355 633 ntBASIC5.69□□□□□ -1.5
SOX1O00570 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 AC005224.3-201ENST00000584683 2140 ntBASIC5.69□□□□□ -1.5
SOX1O00570 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SOX1O00570 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SOX1O00570 AL078621.3-201ENST00000623707 2042 ntBASIC5.69□□□□□ -1.5
SOX1O00570 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SOX1O00570 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.69□□□□□ -1.5
SOX1O00570 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SOX1O00570 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.68□□□□□ -1.5
SOX1O00570 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 AC011504.1-201ENST00000623331 4103 ntBASIC5.68□□□□□ -1.5
SOX1O00570 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SOX1O00570 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SOX1O00570 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 MIR208A-201ENST00000362287 71 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RNU5E-8P-201ENST00000363502 116 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RNU6-522P-201ENST00000364497 107 ntBASIC5.68□□□□□ -1.5
SOX1O00570 U3.12-201ENST00000364498 214 ntBASIC5.68□□□□□ -1.5
SOX1O00570 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 Y_RNA.414-201ENST00000384011 101 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RNU6-1106P-201ENST00000390845 107 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RNU6-903P-201ENST00000391270 109 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AL606923.1-201ENST00000406616 190 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC074085.1-201ENST00000413598 418 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.68□□□□□ -1.5
SOX1O00570 RPL31P45-201ENST00000419532 356 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AL590233.1-201ENST00000430017 456 ntBASIC5.68□□□□□ -1.5
SOX1O00570 TIMM9P1-201ENST00000436122 256 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RPS26P56-201ENST00000444468 240 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC107399.1-201ENST00000451226 265 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AL049714.1-201ENST00000466686 347 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RPL12P20-201ENST00000475538 479 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AP000797.2-201ENST00000475768 606 ntBASIC5.68□□□□□ -1.5
SOX1O00570 RN7SL165P-201ENST00000477476 291 ntBASIC5.68□□□□□ -1.5
SOX1O00570 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.68□□□□□ -1.5
SOX1O00570 CR383656.1-201ENST00000484916 377 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC083904.1-201ENST00000487828 231 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC005912.1-201ENST00000495392 255 ntBASIC5.68□□□□□ -1.5
SOX1O00570 SMURF2P1-201ENST00000514992 481 ntBASIC5.68□□□□□ -1.5
SOX1O00570 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.68□□□□□ -1.5
SOX1O00570 AC110588.1-201ENST00000559699 137 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC023575.1-201ENST00000580510 358 ntBASIC5.68□□□□□ -1.5
SOX1O00570 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.68□□□□□ -1.5
SOX1O00570 MIR6716-201ENST00000613413 80 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC007546.1-201ENST00000619452 559 ntBASIC5.68□□□□□ -1.5
SOX1O00570 AC011944.2-201ENST00000624440 683 ntBASIC5.68□□□□□ -1.5
SOX1O00570 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.68□□□□□ -1.5
SOX1O00570 XPOTP1-201ENST00000443317 2398 ntBASIC5.68□□□□□ -1.5
SOX1O00570 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SOX1O00570 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.68□□□□□ -1.5
SOX1O00570 ZNF402P-201ENST00000404435 3100 ntBASIC5.68□□□□□ -1.5
SOX1O00570 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
SOX1O00570 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 AC011460.1-201ENST00000636268 1834 ntBASIC5.67□□□□□ -1.5
SOX1O00570 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SOX1O00570 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SOX1O00570 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SOX1O00570 OR1S2-201ENST00000302592 978 ntBASIC5.67□□□□□ -1.5
SOX1O00570 HSPE1P11-201ENST00000339579 310 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC117470.1-201ENST00000381974 330 ntBASIC5.67□□□□□ -1.5
SOX1O00570 SNORA70H-201ENST00000383910 135 ntBASIC5.67□□□□□ -1.5
SOX1O00570 SNORA70J-201ENST00000384182 135 ntBASIC5.67□□□□□ -1.5
SOX1O00570 Y_RNA.452-201ENST00000384202 108 ntBASIC5.67□□□□□ -1.5
SOX1O00570 U3.20-201ENST00000390909 217 ntBASIC5.67□□□□□ -1.5
SOX1O00570 MIR548K-201ENST00000408406 116 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC116036.1-201ENST00000412199 367 ntBASIC5.67□□□□□ -1.5
SOX1O00570 GSTM3P2-201ENST00000412746 530 ntBASIC5.67□□□□□ -1.5
SOX1O00570 AC009310.1-201ENST00000414414 451 ntBASIC5.67□□□□□ -1.5
SOX1O00570 NUP35P1-201ENST00000422734 947 ntBASIC5.67□□□□□ -1.5
SOX1O00570 NPM1P18-201ENST00000434232 732 ntBASIC5.67□□□□□ -1.5
SOX1O00570 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SOX1O00570 RPL32P28-201ENST00000443577 397 ntBASIC5.67□□□□□ -1.5
SOX1O00570 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms