Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SCGB1D5P-201ENST00000515134 247 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 MTND2P26-201ENST00000528255 1029 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AL133271.1-201ENST00000538229 291 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 ELOCP31-201ENST00000540463 467 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.4□□□□□ -2.03
SDCBPO00560 AL121594.4-201ENST00000556211 1196 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.4□□□□□ -2.03
SDCBPO00560 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.4□□□□□ -2.03
SDCBPO00560 AL133393.1-201ENST00000603277 287 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 YPEL5P2-201ENST00000605553 359 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AC005046.1-201ENST00000608515 625 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
SDCBPO00560 AC004777.1-201ENST00000624317 287 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
SDCBPO00560 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.4□□□□□ -2.03
SDCBPO00560 GABRG2-229ENST00000641017 3628 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 Z82195.2-201ENST00000612348 18351 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 MIR421-201ENST00000365696 85 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 RNU6-891P-201ENST00000384280 111 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SDCBPO00560 AL138885.1-201ENST00000405921 675 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 SNORA11C-201ENST00000408532 129 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AL024507.1-201ENST00000412741 274 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AC244098.2-201ENST00000422068 99 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SDCBPO00560 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 RPL39P40-201ENST00000445481 146 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 HMGB1P5-202ENST00000451497 985 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.39□□□□□ -2.03
SDCBPO00560 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SDCBPO00560 RPS26P21-201ENST00000475397 348 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.39□□□□□ -2.03
SDCBPO00560 RN7SKP282-201ENST00000516824 299 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 IGKV2-36-201ENST00000519999 223 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC084033.1-201ENST00000550830 633 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.39□□□□□ -2.03
SDCBPO00560 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC012493.2-201ENST00000595083 291 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC002076.2-201ENST00000617362 122 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SDCBPO00560 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.39□□□□□ -2.03
SDCBPO00560 AC092447.7-201ENST00000422212 1621 ntBASIC2.39□□□□□ -2.03
SDCBPO00560 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 AC092593.1-201ENST00000515413 1815 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SDCBPO00560 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SDCBPO00560 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SDCBPO00560 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 SAR1AP2-201ENST00000392696 594 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 AL512633.1-201ENST00000399931 655 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 RPL31P2-201ENST00000413849 377 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 AC006994.1-201ENST00000438212 839 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC023512.1-201ENST00000444513 499 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC093392.2-201ENST00000450682 337 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 RPL37P3-201ENST00000456825 293 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 HMGN1P8-201ENST00000463578 288 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.38□□□□□ -2.03
SDCBPO00560 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 AC108120.2-201ENST00000512973 294 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 SNORA9.3-201ENST00000516383 129 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 SNORA31.26-201ENST00000517250 137 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.38□□□□□ -2.03
SDCBPO00560 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.38□□□□□ -2.03
SDCBPO00560 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 HPRT1P3-201ENST00000539521 576 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.38□□□□□ -2.03
SDCBPO00560 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.38□□□□□ -2.03
SDCBPO00560 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SDCBPO00560 ZNF92P3-201ENST00000596594 954 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 SNRPGP15-201ENST00000600149 222 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC079880.2-201ENST00000603790 1213 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AP004372.1-201ENST00000604842 844 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC135803.1-201ENST00000608748 565 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AL359198.2-201ENST00000611836 194 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AL162274.2-201ENST00000614406 332 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 CYCSP41-201ENST00000616920 296 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 MIR6864-201ENST00000617935 70 ntBASIC2.38□□□□□ -2.03
SDCBPO00560 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.38□□□□□ -2.03
SDCBPO00560 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SDCBPO00560 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms