Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AC007954.1-201ENST00000554198 494 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 SULT1C2P1-202ENST00000562418 459 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 MIR4472-2-201ENST00000582069 67 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AL136981.2-201ENST00000617319 734 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 AC025125.1-201ENST00000624743 1922 ntBASIC2.62□□□□□ -1.99
CACNA1AO00555 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1AO00555 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1AO00555 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1AO00555 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1AO00555 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CACNA1AO00555 Y_RNA.390-201ENST00000383932 102 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CACNA1AO00555 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CACNA1AO00555 RPS26P3-201ENST00000470205 348 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 ACTG1P13-201ENST00000486987 1043 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 AC093767.1-201ENST00000504523 156 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1AO00555 AC022069.1-201ENST00000582910 658 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
CACNA1AO00555 MTCO1P4-201ENST00000520516 1409 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 RNA5SP62-201ENST00000363457 110 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 Y_RNA.471-201ENST00000384312 102 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 MIR513A2-201ENST00000385249 127 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 RPL7P46-201ENST00000425129 740 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 RPL23AP15-201ENST00000450202 459 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1AO00555 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.61□□□□□ -1.99
CACNA1AO00555 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CACNA1AO00555 RN7SKP40-201ENST00000517211 242 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1AO00555 AP000859.1-201ENST00000525536 307 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 AP002748.2-201ENST00000528671 348 ntBASIC2.61□□□□□ -1.99
CACNA1AO00555 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.61□□□□□ -1.99
CACNA1AO00555 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1AO00555 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1AO00555 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.61□□□□□ -1.99
CACNA1AO00555 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC2.61□□□□□ -1.99
CACNA1AO00555 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA1AO00555 AC006020.1-201ENST00000420179 1854 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
CACNA1AO00555 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA1AO00555 RNU2-68P-201ENST00000410878 191 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 RPL7P8-201ENST00000411964 730 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 FTH1P12-201ENST00000432137 551 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.6□□□□□ -1.99
CACNA1AO00555 AC092473.1-201ENST00000441098 221 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 AL591719.1-201ENST00000444669 744 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 AC068587.2-201ENST00000478386 781 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.6□□□□□ -1.99
CACNA1AO00555 RPPH1-2P-201ENST00000516688 293 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1AO00555 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA1AO00555 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CACNA1AO00555 Y_RNA.354-201ENST00000365448 111 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CACNA1AO00555 RPL21P109-201ENST00000422213 475 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.6□□□□□ -1.99
CACNA1AO00555 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.6□□□□□ -1.99
CACNA1AO00555 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC2.6□□□□□ -1.99
CACNA1AO00555 MIR4727-201ENST00000622232 55 ntBASIC2.6□□□□□ -1.99
CACNA1AO00555 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
CACNA1AO00555 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC2.59□□□□□ -1.99
CACNA1AO00555 GABPAP-201ENST00000419271 1356 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CACNA1AO00555 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.59□□□□□ -1.99
CACNA1AO00555 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -1.99
CACNA1AO00555 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CACNA1AO00555 RPS15AP12-201ENST00000419498 388 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 HIGD1AP2-201ENST00000446367 280 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.59□□□□□ -1.99
CACNA1AO00555 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
CACNA1AO00555 OR5AP1P-201ENST00000529730 940 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 OR5D17P-201ENST00000531492 978 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.59□□□□□ -1.99
CACNA1AO00555 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.59□□□□□ -1.99
CACNA1AO00555 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.59□□□□□ -1.99
CACNA1AO00555 uc_338.32-201ENST00000615087 172 ntBASIC2.59□□□□□ -1.99
CACNA1AO00555 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CACNA1AO00555 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.59□□□□□ -2
CACNA1AO00555 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.59□□□□□ -2
CACNA1AO00555 RNA5SP52-201ENST00000362448 134 ntBASIC2.59□□□□□ -2
CACNA1AO00555 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1AO00555 AL583834.1-201ENST00000406943 343 ntBASIC2.59□□□□□ -2
CACNA1AO00555 SRIP3-201ENST00000413200 219 ntBASIC2.59□□□□□ -2
CACNA1AO00555 SKP1P1-201ENST00000438081 489 ntBASIC2.59□□□□□ -2
CACNA1AO00555 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
CACNA1AO00555 HMGN1P5-201ENST00000448591 263 ntBASIC2.59□□□□□ -2
CACNA1AO00555 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.59□□□□□ -2
CACNA1AO00555 OR4G11P-201ENST00000492842 939 ntBASIC2.59□□□□□ -2
CACNA1AO00555 RNU6-295P-201ENST00000516901 104 ntBASIC2.59□□□□□ -2
CACNA1AO00555 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1AO00555 SULT1C2P2-201ENST00000562517 294 ntBASIC2.59□□□□□ -2
CACNA1AO00555 VN1R80P-201ENST00000597126 338 ntBASIC2.59□□□□□ -2
CACNA1AO00555 BNIP3P38-201ENST00000601117 544 ntBASIC2.59□□□□□ -2
CACNA1AO00555 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.59□□□□□ -2
CACNA1AO00555 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CACNA1AO00555 CUL1P1-201ENST00000509510 2425 ntBASIC2.58□□□□□ -2
CACNA1AO00555 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CACNA1AO00555 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms