Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC091564.1-201ENST00000464563 479 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 RPS4XP10-201ENST00000465034 731 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC116337.2-201ENST00000477662 156 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 RPL21P103-201ENST00000479921 488 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 AC010625.1-201ENST00000511296 403 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 FTH1P9-201ENST00000513251 355 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 RN7SKP116-201ENST00000516902 319 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 COX6CP8-201ENST00000522620 226 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXN3O00409 AC007115.1-201ENST00000546853 234 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AL109766.1-201ENST00000555080 552 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 AC107954.1-201ENST00000565906 727 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN3O00409 MIR4715-201ENST00000584117 79 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXN3O00409 MIR548AB-201ENST00000584917 84 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 DEFB131E-202ENST00000602581 683 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC128687.1-201ENST00000605304 619 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC103591.3-201ENST00000608684 209 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC012360.2-201ENST00000609349 391 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AC026368.1-201ENST00000614934 690 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 AL356121.2-201ENST00000624715 780 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN3O00409 EIF2AP4-201ENST00000424793 1781 ntBASIC4.62□□□□□ -1.67
FOXN3O00409 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
FOXN3O00409 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
FOXN3O00409 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN3O00409 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 RNU6-989P-201ENST00000362756 107 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 RNU4-21P-201ENST00000362802 126 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 RNU5F-6P-201ENST00000362979 116 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 RNA5SP28-201ENST00000363841 119 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 RPS23P10-201ENST00000416185 486 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 MTCO1P21-201ENST00000416634 589 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AL161631.1-201ENST00000417933 486 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN3O00409 AL389915.1-201ENST00000422463 466 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC092832.1-201ENST00000422934 400 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 SDCBPP1-201ENST00000440192 890 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 TRIM60P18-201ENST00000441518 828 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 BMI1P1-201ENST00000445879 941 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 RPS29P33-201ENST00000456717 146 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 OR6K1P-201ENST00000456766 971 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 SNORD108-201ENST00000459332 71 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC104164.2-201ENST00000496953 495 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC108145.1-201ENST00000503770 153 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 RNU6-27P-201ENST00000516146 107 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXN3O00409 IGHV3-32-201ENST00000519182 355 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC134698.5-201ENST00000519444 336 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC090281.1-201ENST00000523019 276 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 OR5AP1P-201ENST00000529730 940 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC006064.5-201ENST00000541782 248 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN3O00409 MIR544B-201ENST00000582372 78 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 VN1R79P-201ENST00000593540 513 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC073544.2-201ENST00000601155 540 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC113403.1-201ENST00000604910 193 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 MTND4P26-201ENST00000415971 1359 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 NOL8P1-201ENST00000508336 3529 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXN3O00409 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN3O00409 MFSD8-242ENST00000641690 4199 ntBASIC4.61□□□□□ -1.67
FOXN3O00409 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN3O00409 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN3O00409 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms