Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC093014.1-201ENST00000548926 724 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC025918.2-201ENST00000558683 763 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 MIR5004-201ENST00000579078 107 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AL031985.2-201ENST00000600955 480 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 HMGN2P28-201ENST00000606102 262 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 STMN1P1-201ENST00000617809 440 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 U73479.1-201ENST00000618062 168 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.87□□□□□ -1.95
UPK1AO00322 AC026422.1-201ENST00000623961 452 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AC046144.1-201ENST00000478559 1853 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 AC011978.2-201ENST00000569835 2054 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 MAPK10-362ENST00000641864 4484 ntBASIC2.87□□□□□ -1.95
UPK1AO00322 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1AO00322 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
UPK1AO00322 AL157700.1-201ENST00000561973 1432 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1AO00322 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1AO00322 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1AO00322 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1AO00322 SNORA31-201ENST00000362607 130 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AL356057.1-202ENST00000402263 756 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 RPL7P25-201ENST00000404151 721 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC092745.2-202ENST00000411880 369 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.86□□□□□ -1.95
UPK1AO00322 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 ARL2BPP3-201ENST00000421226 480 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1AO00322 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 AC011242.1-201ENST00000433596 1158 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC006994.1-201ENST00000438212 839 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 UBE2V1P5-201ENST00000440070 405 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.86□□□□□ -1.95
UPK1AO00322 AL513321.1-201ENST00000441175 761 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AL662791.1-201ENST00000441992 928 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 NPM1P49-201ENST00000448027 714 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC091179.1-201ENST00000461606 579 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 RN7SL633P-201ENST00000488974 297 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
UPK1AO00322 HIGD1AP3-201ENST00000515857 278 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.86□□□□□ -1.95
UPK1AO00322 OR5G4P-201ENST00000525251 760 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 AC027104.1-201ENST00000563702 681 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 AC233266.2-201ENST00000567067 528 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1AO00322 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1AO00322 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1AO00322 YPEL5P2-201ENST00000605553 359 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 MIR92B-201ENST00000607575 96 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.86□□□□□ -1.95
UPK1AO00322 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.86□□□□□ -1.95
UPK1AO00322 AL590396.2-201ENST00000636511 1041 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 AC017104.5-201ENST00000637647 639 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
UPK1AO00322 AC104446.1-201ENST00000613728 1321 ntBASIC2.86□□□□□ -1.95
UPK1AO00322 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
UPK1AO00322 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.85□□□□□ -1.95
UPK1AO00322 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
UPK1AO00322 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.85□□□□□ -1.95
UPK1AO00322 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
UPK1AO00322 AC016716.1-201ENST00000265882 708 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 AC073325.2-201ENST00000339545 159 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AL353692.2-201ENST00000407054 335 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 SNORA11-201ENST00000408789 128 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 DPPA2P1-201ENST00000428060 556 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AL513343.1-201ENST00000451818 792 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 MTND2P6-201ENST00000455337 1030 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.85□□□□□ -1.95
UPK1AO00322 RPS17P11-201ENST00000474297 293 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AP001207.1-201ENST00000524051 481 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.85□□□□□ -1.95
UPK1AO00322 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.85□□□□□ -1.95
UPK1AO00322 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
UPK1AO00322 MIR4504-201ENST00000577413 92 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.85□□□□□ -1.95
UPK1AO00322 SRGNP1-201ENST00000603392 451 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC024220.1-201ENST00000603675 484 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC091488.1-201ENST00000604239 660 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AL009028.1-201ENST00000604895 802 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC135178.6-201ENST00000605314 398 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
UPK1AO00322 MIR1264-201ENST00000616374 69 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 AC018926.3-201ENST00000618841 406 ntBASIC2.85□□□□□ -1.95
UPK1AO00322 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms