Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC118282.1-201ENST00000506408 765 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC119751.4-201ENST00000507498 357 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM1O00151 SNORA64.4-201ENST00000516632 81 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 SNORA31.26-201ENST00000517250 137 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC104027.1-201ENST00000521887 300 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 DEFB130C-202ENST00000530001 230 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC120057.2-201ENST00000571520 271 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 MIR5708-201ENST00000579723 85 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 MIR4666A-201ENST00000580160 79 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM1O00151 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM1O00151 AC093227.2-201ENST00000589357 285 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 AL592148.2-201ENST00000612210 372 ntBASIC3.46□□□□□ -1.86
PDLIM1O00151 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM1O00151 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM1O00151 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM1O00151 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM1O00151 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 FAM91A3P-201ENST00000456826 2544 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 HMGB1P5-201ENST00000255320 642 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 RNU6-839P-201ENST00000363347 108 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 RNU6-1226P-201ENST00000384317 107 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 SNORD116-23-201ENST00000384645 92 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MIR649-201ENST00000384843 97 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MIR607-201ENST00000385241 96 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AL121978.1-201ENST00000402778 359 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AL139098.1-201ENST00000407291 389 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 RNA5SP344-201ENST00000411081 104 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MTND4P22-201ENST00000413116 1169 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM1O00151 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AL449283.1-202ENST00000418249 604 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 Z97055.1-201ENST00000419730 712 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MTCYBP24-201ENST00000420387 1106 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.45□□□□□ -1.86
PDLIM1O00151 RPS3AP46-201ENST00000448352 682 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC093392.2-201ENST00000450682 337 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 ARPC3P2-201ENST00000457786 533 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 snoU109.3-201ENST00000459477 145 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 RNF138P1-201ENST00000502765 546 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC096571.1-202ENST00000506634 735 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC104057.1-201ENST00000515547 497 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 HIGD1AP3-201ENST00000515857 278 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 RN7SKP282-201ENST00000516824 299 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC091163.3-201ENST00000518269 1144 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC021451.1-201ENST00000523498 1129 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC006960.3-201ENST00000561845 705 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC093519.1-201ENST00000566109 298 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.45□□□□□ -1.86
PDLIM1O00151 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 GAS5-AS1-201ENST00000602767 694 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 AC069431.2-201ENST00000604149 1099 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 HMGN2P28-201ENST00000606102 262 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 SNORA62.6-201ENST00000606322 83 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.45□□□□□ -1.86
PDLIM1O00151 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM1O00151 LRRC77P-213ENST00000637727 880 ntBASIC3.45□□□□□ -1.86
PDLIM1O00151 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.45□□□□□ -1.86
PDLIM1O00151 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM1O00151 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PDLIM1O00151 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.44□□□□□ -1.86
PDLIM1O00151 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDLIM1O00151 SNORD56.3-201ENST00000363507 71 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 RNA5SP42-201ENST00000364278 115 ntBASIC3.44□□□□□ -1.86
PDLIM1O00151 SNORA51.2-201ENST00000364595 132 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms