Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.159-201ENST00000363674 87 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 RNU1-39P-201ENST00000383897 165 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 SNORA2.3-201ENST00000383920 135 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 RNU6-1226P-201ENST00000384317 107 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 RNU6-373P-201ENST00000411247 98 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC108075.1-201ENST00000424692 529 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 COX6CP13-201ENST00000428703 226 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 OR51AB1P-201ENST00000429046 620 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 BX323845.1-201ENST00000432417 179 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 HIGD1AP8-201ENST00000453927 274 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 SETP20-201ENST00000457046 852 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AP000942.1-201ENST00000463969 747 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC007537.2-201ENST00000472093 511 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC010301.1-201ENST00000473936 355 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 RPL7P42-201ENST00000481005 679 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 UBA52P7-201ENST00000486088 380 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 COX6B1P2-201ENST00000489624 230 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC093278.1-201ENST00000494700 600 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC108693.1-201ENST00000496068 432 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AP006245.2-201ENST00000522004 300 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 SULT1C2P1-202ENST00000562418 459 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 RN7SL802P-201ENST00000577858 299 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 FKBP1AP1-201ENST00000594588 318 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC007687.1-201ENST00000602704 304 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AL121655.1-201ENST00000605811 308 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 HSPE1P14-201ENST00000605812 302 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC015871.5-202ENST00000623252 701 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 NEAT1-202ENST00000501122 22743 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 AC104623.2-202ENST00000623477 4002 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 THAP12P5-201ENST00000405864 2275 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.06□□□□□ -1.76
CGB1A6NKQ9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.06□□□□□ -1.76
CGB1A6NKQ9 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AL136964.1-201ENST00000622038 2990 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AL731532.2-201ENST00000623542 1953 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 NMD3P1-201ENST00000439704 1488 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.58-201ENST00000362807 102 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNU6-984P-201ENST00000363236 109 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.154-201ENST00000363624 102 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNU6-289P-201ENST00000364093 107 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNY3P1-201ENST00000365085 102 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNU6-282P-201ENST00000365357 103 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RNY3-201ENST00000365484 102 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.394-201ENST00000383942 103 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 Y_RNA.490-201ENST00000384413 102 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 RPS20P2-201ENST00000402520 389 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 MRPL42P2-201ENST00000403169 426 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 HMGB1P17-201ENST00000403495 628 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC127391.1-201ENST00000411737 98 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC007738.1-201ENST00000413892 348 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 SNRPFP1-201ENST00000414761 252 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 MTCO3P12-201ENST00000416718 547 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CGB1A6NKQ9 AL353729.1-201ENST00000425044 720 ntBASIC4.05□□□□□ -1.76
CGB1A6NKQ9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms