Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 GSTA9P-201ENST00000406231 611 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 SNORA77-201ENST00000408716 125 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RNA5SP296-201ENST00000410523 111 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RNU2-8P-201ENST00000410727 190 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 MTND3P17-201ENST00000416968 344 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 TIMM9P3-201ENST00000428659 274 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RPS29P9-201ENST00000440360 171 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RBMX2P4-201ENST00000441256 376 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC079448.1-201ENST00000449377 373 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL353691.1-201ENST00000451332 387 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC104308.1-201ENST00000454621 333 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RPS20P24-201ENST00000457473 361 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 snoU109.4-201ENST00000458953 143 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 SNRPCP3-201ENST00000474888 476 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC021382.1-201ENST00000483523 359 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RPL23AP41-201ENST00000484754 458 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 UBE2L4-201ENST00000587688 464 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL606834.2-201ENST00000602954 668 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC004853.1-201ENST00000604902 698 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 IMMP1LP1-201ENST00000605170 488 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AP000860.1-201ENST00000605250 559 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AP003117.2-201ENST00000606010 545 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AC105429.2-201ENST00000610567 517 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 AL158801.5-201ENST00000623123 465 ntBASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
CCDC85CA6NKD9 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC092125.1-201ENST00000562568 1995 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SMG1P4-204ENST00000523028 4131 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC073346.2-201ENST00000624724 2058 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 RNA5SP366-201ENST00000365454 123 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SNORA70E-201ENST00000384492 135 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 MTCYBP24-201ENST00000420387 1106 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AL133547.1-201ENST00000448546 220 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 RPL12P39-201ENST00000455456 496 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SNORD121B-201ENST00000458838 81 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 COX7A2P2-201ENST00000505291 250 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 RN7SKP13-201ENST00000515933 244 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC110994.2-201ENST00000635481 492 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 AC010149.2-201ENST00000637608 315 ntBASIC5.4□□□□□ -1.54
CCDC85CA6NKD9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 MTCO1P24-201ENST00000515438 1558 ntBASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC85CA6NKD9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 LINC01109-201ENST00000603837 3081 ntBASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85CA6NKD9 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms