Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC092162.1-201ENST00000432828 434 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 FTLP19-201ENST00000433300 394 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC090804.1-201ENST00000448870 490 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 PPIAP3-201ENST00000450588 505 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC118758.1-202ENST00000454719 225 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RPS23P2-201ENST00000463671 415 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RPL7P43-201ENST00000478876 753 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC106872.2-201ENST00000494303 480 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 HMGN1P16-201ENST00000508308 283 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC104806.1-201ENST00000508720 308 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RNU6-189P-201ENST00000516120 101 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC107958.1-201ENST00000556576 290 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 MIR3154-201ENST00000577829 84 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 MIR4293-201ENST00000584305 78 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC012368.3-201ENST00000604190 219 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AL451044.1-201ENST00000604867 238 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC007938.3-201ENST00000604965 623 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC103705.1-201ENST00000619013 241 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC138965.3-201ENST00000623875 498 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 API5P2-201ENST00000397055 1498 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC066616.2-201ENST00000559334 1481 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AP005432.1-201ENST00000580891 3485 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 AC008627.1-201ENST00000517511 1704 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 LINC01613-201ENST00000561476 2780 ntBASIC4.91□□□□□ -1.62
SHISA3A0PJX4 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.91□□□□□ -1.62
SHISA3A0PJX4 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
SHISA3A0PJX4 RNU6-1284P-201ENST00000363701 100 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RNU6-574P-201ENST00000384265 107 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RNU6-1106P-201ENST00000390845 107 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RNU6-907P-201ENST00000390924 102 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AL121834.1-202ENST00000404494 277 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AL035422.1-201ENST00000414193 397 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 MTCYBP9-201ENST00000431021 303 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC005019.1-201ENST00000436455 431 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 MRPS31P2-201ENST00000451581 518 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 GEMIN2P1-201ENST00000454246 752 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RPL30P15-201ENST00000457129 321 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RPS20P21-201ENST00000466859 343 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC113367.2-201ENST00000505749 160 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 ENPP7P11-201ENST00000505915 627 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RNU6-27P-201ENST00000516146 107 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RN7SKP70-201ENST00000516655 271 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 RN7SKP295-201ENST00000517264 153 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 HMGB1P19-201ENST00000517578 577 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 HMGN1P28-201ENST00000521340 364 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC027369.5-201ENST00000533838 755 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 SETP7-201ENST00000552169 453 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC040958.1-201ENST00000561102 201 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC138761.3-201ENST00000579993 334 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AF038458.1-201ENST00000588406 262 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 VN1R107P-201ENST00000601784 209 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AL136228.1-201ENST00000622221 319 ntBASIC4.9□□□□□ -1.63
SHISA3A0PJX4 AP001784.1-201ENST00000624107 428 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms