Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 OR5D17P-201ENST00000531492 978 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 MIR3158-1-201ENST00000583596 81 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 BNIP3P40-201ENST00000596017 556 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AL121772.2-201ENST00000614331 297 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 AC090116.1-201ENST00000615679 446 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 OR1S1-201ENST00000624470 978 ntBASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATG4BQ9Y4P1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 SNORA51.2-201ENST00000364595 132 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 RNU6-761P-201ENST00000384148 107 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 Y_RNA.472-201ENST00000384322 102 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 MIR506-201ENST00000384998 124 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 PTMAP2-201ENST00000397627 327 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AL024474.1-201ENST00000404655 591 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 RNU2-37P-201ENST00000410695 177 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC009237.5-201ENST00000414271 501 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 HMGB3P20-201ENST00000417997 600 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC092634.6-201ENST00000418558 192 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC004854.1-201ENST00000440356 349 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AL645638.1-201ENST00000440519 361 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC079776.3-201ENST00000450665 370 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 PNPLA4P1-201ENST00000458328 305 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 ACTR3P3-201ENST00000480448 893 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AP002812.1-201ENST00000495378 474 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 RN7SKP83-201ENST00000516512 178 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AL121766.1-201ENST00000547436 487 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC103881.1-201ENST00000603476 538 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC073968.1-201ENST00000618594 637 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC010975.3-201ENST00000618727 978 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AL158163.2-201ENST00000619110 700 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 CR392039.5-201ENST00000623201 510 ntBASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.49□□□□□ -1.85
ATG4BQ9Y4P1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 AC066616.2-201ENST00000559334 1481 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 MFSD8-236ENST00000641509 4050 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 RNU6-492P-201ENST00000363035 104 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 RNU4-51P-201ENST00000364206 140 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 RNVU1-3-201ENST00000364313 161 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 SNORA51.6-201ENST00000384151 125 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 RNU6-1300P-201ENST00000391046 108 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 HSPE1P26-201ENST00000405341 275 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 AL513174.1-201ENST00000423182 629 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 RPF2P1-201ENST00000424137 906 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 AC017083.1-201ENST00000428093 483 ntBASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
ATG4BQ9Y4P1 MRPS18BP2-201ENST00000434310 759 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms