Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 RNA5SP154-201ENST00000516193 111 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 MYL12AP1-201ENST00000518490 515 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 HSPA8P13-201ENST00000523715 472 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AP000873.5-201ENST00000533906 236 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC092470.1-201ENST00000546187 132 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC025588.4-201ENST00000615802 908 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 AC009878.1-201ENST00000621819 340 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.22□□□□□ -1.73
PKP3Q9Y446 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PKP3Q9Y446 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
PKP3Q9Y446 GDI2P1-201ENST00000429312 1336 ntBASIC4.21□□□□□ -1.73
PKP3Q9Y446 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PKP3Q9Y446 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
PKP3Q9Y446 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 RPL23AP57-201ENST00000332361 466 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 MIR448-201ENST00000362131 111 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 MIR93-201ENST00000385024 80 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL138880.1-201ENST00000405824 642 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 PGBD4P8-201ENST00000412993 562 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC004987.3-201ENST00000413879 771 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL389915.1-201ENST00000422463 466 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 RPL23AP38-201ENST00000423801 469 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 HLA-N-201ENST00000437516 135 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 EPS15P1-201ENST00000448836 336 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL445669.2-201ENST00000454425 421 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC109327.1-201ENST00000471666 403 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC087385.1-201ENST00000475062 312 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC017015.1-201ENST00000477387 286 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC090453.1-201ENST00000495560 436 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC006499.6-201ENST00000511169 607 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC105233.3-201ENST00000531125 744 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC068587.4-201ENST00000533893 186 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC063950.1-201ENST00000552036 308 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC022146.1-201ENST00000595307 847 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC007566.2-201ENST00000603642 413 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC080013.4-201ENST00000607624 649 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC090425.2-201ENST00000608818 501 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC025594.3-201ENST00000613068 790 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 AC009318.4-201ENST00000620496 486 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 MIR3653-201ENST00000625572 110 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 CYP3A51P-201ENST00000633513 256 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 SAGE4P-201ENST00000442271 3381 ntBASIC4.21□□□□□ -1.74
PKP3Q9Y446 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PKP3Q9Y446 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PKP3Q9Y446 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 AL133243.3-201ENST00000617415 3004 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP3Q9Y446 KPNA2P2-201ENST00000419546 1489 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.2□□□□□ -1.74
PKP3Q9Y446 ENSAP1-201ENST00000392855 326 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 OR6C69P-201ENST00000394268 893 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PKP3Q9Y446 AC025750.1-201ENST00000399891 379 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 MIR320C1-201ENST00000408566 88 ntBASIC4.2□□□□□ -1.74
PKP3Q9Y446 RPL31P2-201ENST00000413849 377 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms