Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS9D1Q9Y2B5 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
VPS9D1Q9Y2B5 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.61□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 TMCC1P1-201ENST00000518897 1980 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AL391516.1-201ENST00000554380 2449 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 SNORA63.4-201ENST00000362763 126 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RNY3P4-201ENST00000384428 101 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AL139100.1-201ENST00000408001 498 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RNA5SP494-201ENST00000410653 129 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 DPPA2P2-201ENST00000418220 897 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RPS4XP5-201ENST00000419038 768 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RPS15AP6-201ENST00000420703 385 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RPS17P13-201ENST00000448974 407 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AL353691.1-201ENST00000451332 387 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 RN7SKP196-201ENST00000516267 345 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.689-201ENST00000516589 107 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC130366.1-201ENST00000526505 1192 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC007458.1-201ENST00000542812 373 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC120057.2-201ENST00000571520 271 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 MIR5696-201ENST00000578474 85 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 MIR4308-201ENST00000580634 81 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC019257.2-201ENST00000605539 497 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 MIR8082-201ENST00000612488 81 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 Z99571.1-201ENST00000636677 394 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC068870.1-201ENST00000563737 2455 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 AC008957.3-201ENST00000624112 2242 ntBASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
VPS9D1Q9Y2B5 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AC010624.4-201ENST00000597606 1351 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 RNU6-834P-201ENST00000362367 110 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.82-201ENST00000363000 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.92-201ENST00000363043 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 RNA5SP382-201ENST00000363355 112 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.235-201ENST00000364412 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.306-201ENST00000365015 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.312-201ENST00000365089 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.322-201ENST00000365151 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AL359694.1-201ENST00000403247 604 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 HMGN1P20-201ENST00000411849 300 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 DPPA2P3-201ENST00000411853 655 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AL359092.1-201ENST00000417156 265 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 RBMY2TP-201ENST00000451162 947 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.650-201ENST00000459002 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AC007998.1-201ENST00000474156 672 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 RNY3P16-201ENST00000516338 101 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 Y_RNA.777-201ENST00000516982 102 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.59□□□□□ -1.35
VPS9D1Q9Y2B5 AC026956.1-201ENST00000558741 396 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms