Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RNU6-108P-201ENST00000365558 107 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.376-201ENST00000365638 108 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 SNORA75B-201ENST00000384053 137 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RNU2-23P-201ENST00000410545 195 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-77P-201ENST00000410554 91 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC007559.1-201ENST00000428736 355 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 MED28P3-201ENST00000444288 531 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 FTH1P25-201ENST00000447665 469 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 MTCO1P27-201ENST00000448269 226 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AL356010.1-201ENST00000456364 102 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RPL21P99-201ENST00000480369 423 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC073610.1-201ENST00000489971 396 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RPS17P5-201ENST00000498293 408 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-714P-201ENST00000516963 103 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 OR5D17P-201ENST00000531492 978 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 TRAV15-201ENST00000556680 249 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 MIR4646-201ENST00000580775 63 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 NANOGP3-201ENST00000605855 286 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 DUSP12P1-201ENST00000612874 516 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC011890.2-201ENST00000613393 294 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 AC068870.1-201ENST00000563737 2455 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 TPTE2P4-201ENST00000258589 1605 ntBASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PDZRN3Q9UPQ7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC020633.1-201ENST00000468439 2247 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RNU6-378P-201ENST00000384324 107 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 MIR613-201ENST00000385248 95 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 MIR16-1-201ENST00000385271 89 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RNU2-51P-201ENST00000410708 197 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 UQCRBP1-201ENST00000421129 336 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RGS17P1-201ENST00000423358 553 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AL158073.1-201ENST00000426848 1104 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC011816.1-201ENST00000441346 546 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC019185.1-201ENST00000442718 389 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 PRPS1P1-201ENST00000445305 876 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AL157827.1-201ENST00000447622 132 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC017015.1-201ENST00000477387 286 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RPS4XP1-201ENST00000482189 787 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RN7SL447P-201ENST00000494711 245 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RNU7-51P-201ENST00000516560 62 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 RN7SKP66-201ENST00000516681 231 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC022616.4-201ENST00000522985 181 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC008126.1-201ENST00000549019 480 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 AC092608.2-201ENST00000624427 218 ntBASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00561-201ENST00000565815 2738 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RNA5SP305-201ENST00000362665 119 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.106-201ENST00000363189 100 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.297-201ENST00000364950 91 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 RNA5SP30-201ENST00000365552 115 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 Y_RNA.518-201ENST00000384552 113 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 SNORD37.1-201ENST00000390968 65 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 VDAC1P9-201ENST00000412766 841 ntBASIC7.1□□□□□ -1.27
PDZRN3Q9UPQ7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms