Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC245054.1-201ENST00000420944 258 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 RPS6P14-201ENST00000425165 719 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 SKP1P1-201ENST00000438081 489 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC010655.1-201ENST00000449336 292 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 MTCO3P16-201ENST00000454456 754 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC015908.1-201ENST00000478739 476 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 RN7SKP244-201ENST00000516513 307 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AP004371.1-201ENST00000525240 214 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AP000790.1-201ENST00000528891 737 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AL669831.4-202ENST00000590817 238 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC020914.6-201ENST00000594327 272 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 VN1R7P-201ENST00000619242 903 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AC048347.1-201ENST00000624621 427 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AP001148.1-201ENST00000624124 2359 ntBASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NPIPA1Q9UND3 AL592494.2-201ENST00000425455 1548 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL365440.1-201ENST00000436135 2167 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 SNORA7.2-201ENST00000364446 145 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 SNORA9-201ENST00000384215 133 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 RNU6-339P-201ENST00000384310 107 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MIR490-201ENST00000384865 128 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 EI24P2-201ENST00000397776 1076 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL023807.1-201ENST00000407932 359 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 RNA5SP56-201ENST00000410277 118 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL136133.1-201ENST00000413694 376 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 RPS7P15-201ENST00000415804 584 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL049610.1-201ENST00000423374 372 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MTCYBP32-201ENST00000427945 1084 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AP000907.1-201ENST00000428428 510 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MOB1AP1-201ENST00000430903 535 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 NEK4P1-201ENST00000433383 879 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC092641.1-201ENST00000440229 772 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC093801.2-201ENST00000503966 1050 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 RNA5SP135-201ENST00000517019 125 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 snoZ278.1-201ENST00000517059 112 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AP003066.2-201ENST00000529375 555 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AP003385.6-201ENST00000531603 374 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC007458.1-201ENST00000542812 373 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC044913.1-201ENST00000557200 430 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC099785.1-201ENST00000605697 437 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.3□□□□□ -1.88
NPIPA1Q9UND3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AL136520.1-201ENST00000600311 1322 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AC234772.1-201ENST00000377927 937 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AL583834.1-201ENST00000406943 343 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AL133264.1-201ENST00000407157 562 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AC009237.5-201ENST00000414271 501 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 FCF1P2-201ENST00000415284 583 ntBASIC3.29□□□□□ -1.88
NPIPA1Q9UND3 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms