Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 Y_RNA.311-201ENST00000365068 96 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 HLFP1-201ENST00000402375 499 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 HMGB1P17-201ENST00000403495 628 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RNU6-712P-201ENST00000410558 100 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC068533.2-201ENST00000411872 306 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC019178.2-201ENST00000423595 505 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 CYCSP43-201ENST00000438233 310 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 HMGB1P12-201ENST00000438594 598 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AF228730.2-201ENST00000438784 848 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RPL26P28-201ENST00000451325 435 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MTCO3P11-201ENST00000455103 774 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RPL18AP17-201ENST00000455326 198 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RPL9P32-201ENST00000464118 620 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 ST13P14-201ENST00000474095 734 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 PRELID3BP5-201ENST00000508612 460 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MIR2116-201ENST00000517221 80 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC008802.1-201ENST00000519121 791 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC018630.1-201ENST00000541376 925 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 MIR5186-201ENST00000577504 120 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC053481.3-201ENST00000577881 843 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AL137849.1-201ENST00000604767 169 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC018755.4-201ENST00000619715 454 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 AC091925.2-201ENST00000625059 256 ntBASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BLOC1S4Q9NUP1 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 PTP4A1P5-201ENST00000420305 455 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 PSMA6P3-201ENST00000428242 164 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 Z95327.1-201ENST00000446082 482 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 UBDP1-202ENST00000457888 382 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 HMGB1P25-201ENST00000468402 607 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 RPL7P38-201ENST00000488396 739 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 TRBV12-2-201ENST00000489763 344 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC010342.1-201ENST00000514047 877 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 ZNF192P1-203ENST00000565888 810 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 MIR3690-201ENST00000580266 75 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 DUXAP3-201ENST00000603616 594 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 MTND3P19-201ENST00000603825 345 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 SNORA62.6-201ENST00000606322 83 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC090425.2-201ENST00000608818 501 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC027449.1-201ENST00000608890 407 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC107075.1-201ENST00000613695 314 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC026368.1-201ENST00000614934 690 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC091046.2-201ENST00000620775 665 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 GABPAP-201ENST00000419271 1356 ntBASIC4.26□□□□□ -1.73
BLOC1S4Q9NUP1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 RNA5SP97-201ENST00000365006 84 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 MTATP6P27-201ENST00000416987 621 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 TOMM22P1-201ENST00000418578 312 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 OR1AA1P-201ENST00000419597 916 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 MTND4LP10-201ENST00000435146 291 ntBASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
BLOC1S4Q9NUP1 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms