Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PRDX3P4-201ENST00000470828 747 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC104689.1-201ENST00000473356 768 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 HMGN2P13-201ENST00000476476 274 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 HSPD1P15-201ENST00000505573 1122 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 RN7SKP96-201ENST00000516948 297 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC109635.4-202ENST00000531666 412 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL606834.2-201ENST00000602954 668 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC008739.3-201ENST00000603262 127 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC019176.2-201ENST00000611579 315 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 MIR7112-201ENST00000616126 65 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
TREX1Q9NSU2 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.11□□□□□ -1.91
TREX1Q9NSU2 AL353746.1-201ENST00000566293 6881 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 OR5T3-201ENST00000303059 1023 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 PRRC2CP1-201ENST00000404428 159 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC245054.2-201ENST00000415639 319 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AL691517.1-201ENST00000440833 1235 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 VN1R34P-201ENST00000447387 883 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 MTND2P6-201ENST00000455337 1030 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 RN7SL75P-201ENST00000461926 281 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC010306.1-201ENST00000523223 1117 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AP000619.3-201ENST00000535634 1127 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC025918.2-201ENST00000558683 763 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC012182.1-201ENST00000570133 895 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AL590282.1-201ENST00000610379 1136 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 MIR622-201ENST00000638396 96 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.1□□□□□ -1.91
TREX1Q9NSU2 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
TREX1Q9NSU2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC016716.1-201ENST00000265882 708 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 SNORA48.7-201ENST00000391302 135 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 RNA5SP120-201ENST00000410900 112 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC005517.2-201ENST00000424673 553 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 RPL21P40-201ENST00000428586 483 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC091862.1-201ENST00000438016 1100 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AL513321.1-201ENST00000441175 761 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC007000.2-201ENST00000442564 487 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 RPL17P49-201ENST00000443728 411 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 Z99714.1-201ENST00000450463 807 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 SLC25A15P5-201ENST00000508033 253 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AP004371.1-201ENST00000525240 214 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 SERPINE4P-201ENST00000554978 281 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC037471.2-201ENST00000564941 598 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.09□□□□□ -1.91
TREX1Q9NSU2 MIR1254-2-201ENST00000579553 63 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 MIR4429-201ENST00000580105 73 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 RN7SL339P-201ENST00000580597 296 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 UBL5P2-201ENST00000583788 219 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 YWHAQP7-201ENST00000603536 658 ntBASIC3.09□□□□□ -1.91
TREX1Q9NSU2 AC004775.1-201ENST00000607389 753 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms