Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 TMSB10P2-201ENST00000416049 131 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC092647.1-201ENST00000420654 287 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 RPL30P3-201ENST00000424262 333 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 MTND1P28-201ENST00000435623 950 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 HLA-N-201ENST00000437516 135 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC092641.1-201ENST00000440229 772 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 RPL39P6-201ENST00000448289 150 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL451050.1-201ENST00000450126 415 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 HMGB3P21-201ENST00000452483 547 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL121877.1-201ENST00000453704 622 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC097493.1-201ENST00000463958 372 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 RPL7P22-201ENST00000466005 733 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 RPL21P126-201ENST00000470049 478 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC018797.3-201ENST00000513388 1241 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL352979.3-201ENST00000553515 247 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC087683.1-201ENST00000591187 441 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC079089.3-201ENST00000603094 673 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 HSPE1P14-201ENST00000605812 302 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC243773.3-201ENST00000613270 256 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC099842.1-201ENST00000619919 596 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 RNU6-156P-201ENST00000621869 107 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AL592437.2-201ENST00000421655 2434 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
USP29Q9HBJ7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.7
USP29Q9HBJ7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 SNORD74.4-201ENST00000364129 80 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 MIR513A2-201ENST00000385249 127 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC011933.1-201ENST00000413334 321 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC073136.2-201ENST00000417282 849 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RPS27AP12-201ENST00000429552 465 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RPL36P19-201ENST00000430744 301 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RPS29P17-201ENST00000430795 166 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 MTCYBP1-201ENST00000454315 1119 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC133473.1-201ENST00000455173 299 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 TPT1P7-201ENST00000458300 517 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC116533.1-201ENST00000459748 321 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC092757.1-201ENST00000467293 467 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 MTND1P5-201ENST00000517906 940 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC022790.1-201ENST00000522872 204 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AL139174.1-201ENST00000531489 886 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC007224.1-201ENST00000564410 144 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AP001094.1-201ENST00000579805 193 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 IPO5P1-202ENST00000600039 287 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC026368.1-201ENST00000614934 690 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC015540.1-201ENST00000615828 501 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC073968.1-201ENST00000618594 637 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AL031985.3-201ENST00000565390 2449 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AC027290.2-201ENST00000623210 18662 ntBASIC4.45□□□□□ -1.7
USP29Q9HBJ7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
USP29Q9HBJ7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP29Q9HBJ7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms