Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AC091390.1-201ENST00000433904 331 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 RPL37P3-201ENST00000456825 293 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 RPL9P32-201ENST00000464118 620 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC108078.3-201ENST00000502633 489 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC114967.1-201ENST00000504890 259 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 MTCO1P35-201ENST00000515270 228 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC023050.2-201ENST00000544968 387 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC005412.1-201ENST00000580812 1049 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 MIR4697-201ENST00000582977 78 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC009948.4-201ENST00000604692 675 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC016877.3-201ENST00000606778 504 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC024257.5-201ENST00000612739 531 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 U4.6-201ENST00000621618 127 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC073476.4-201ENST00000628409 72 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 NSRP1P1-201ENST00000444067 1693 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC090337.1-201ENST00000579651 2074 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 AC012321.1-201ENST00000561622 1588 ntBASIC4.18□□□□□ -1.74
UPF2Q9HAU5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
UPF2Q9HAU5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 RNU6-1214P-201ENST00000363650 109 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 MIR1303-201ENST00000408625 86 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 RN7SKP156-201ENST00000410308 342 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 RNU6-628P-201ENST00000410675 107 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 Z99755.1-201ENST00000414048 380 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 GTF2IP23-201ENST00000423746 351 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 HMGB3P11-201ENST00000440127 604 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 FGF7P5-201ENST00000441829 291 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AL592437.1-201ENST00000443781 492 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 PTENP1-201ENST00000447117 1215 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 HMGN2P7-201ENST00000456186 273 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 RPL30P11-201ENST00000495304 339 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 MIR2116-201ENST00000517221 80 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 HMGB1P23-201ENST00000518743 568 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC053481.4-201ENST00000583164 216 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC006557.5-201ENST00000603126 811 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC013444.2-201ENST00000603317 787 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 MIR6875-201ENST00000617506 72 ntBASIC4.17□□□□□ -1.74
UPF2Q9HAU5 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.17□□□□□ -1.74
UPF2Q9HAU5 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 SNORA70.2-201ENST00000364506 135 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 RNU6-707P-201ENST00000364647 95 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 MTCO2P31-201ENST00000402702 684 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 RNU6-77P-201ENST00000410554 91 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 AC069218.2-201ENST00000411665 344 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 HMGB1P49-201ENST00000418882 569 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 PTP4A1P5-201ENST00000420305 455 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 RPS27AP12-201ENST00000429552 465 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 OR4C10P-201ENST00000434991 931 ntBASIC4.16□□□□□ -1.74
UPF2Q9HAU5 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.16□□□□□ -1.74
UPF2Q9HAU5 NPM1P13-201ENST00000452663 865 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms