Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 AC005412.1-201ENST00000580812 1049 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 HMGN2P28-201ENST00000606102 262 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 U1.23-201ENST00000610293 146 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 RNU1-68P-201ENST00000615382 146 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 U1.39-201ENST00000621562 146 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 AC138649.5-201ENST00000637456 137 ntBASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
VIPAS39Q9H9C1 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC011978.2-201ENST00000569835 2054 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 RNA5SP509-201ENST00000364577 119 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 RNU6-356P-201ENST00000384140 107 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 RNU2-28P-201ENST00000410457 189 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 MTATP6P20-201ENST00000414147 562 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL356968.1-201ENST00000416622 474 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL356320.2-201ENST00000417263 507 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC241584.1-201ENST00000438469 1241 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 RPL23AP76-201ENST00000441860 458 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC108734.3-201ENST00000481241 1165 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 MTCO3P35-201ENST00000485582 781 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 BOLA3P3-201ENST00000505182 232 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC093840.1-201ENST00000511599 336 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC008837.2-201ENST00000513076 418 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC006270.2-201ENST00000578523 652 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC107982.3-201ENST00000584957 985 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC007687.1-201ENST00000602704 304 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL591034.3-201ENST00000605511 685 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC024257.5-201ENST00000612739 531 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 MIR7703-201ENST00000620784 77 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AP000346.3-201ENST00000622821 210 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AP003355.3-201ENST00000623465 114 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 U6.98-201ENST00000637157 84 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AC109315.1-201ENST00000584143 1347 ntBASIC3.59□□□□□ -1.83
VIPAS39Q9H9C1 AL359893.1-201ENST00000447628 1580 ntBASIC3.59□□□□□ -1.84
VIPAS39Q9H9C1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 RNU5D-1-201ENST00000363299 116 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 RNU6-263P-201ENST00000363811 107 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 SNORD116.1-201ENST00000365628 92 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AL023807.1-201ENST00000407932 359 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 RN7SKP53-201ENST00000411337 315 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AC007899.1-201ENST00000412776 775 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 OR8G2P-201ENST00000412796 908 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 SSR1P2-201ENST00000415208 787 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 LUZP4P1-201ENST00000415420 344 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 MRPS36P1-201ENST00000421291 307 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 RPL7P44-201ENST00000424827 742 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AC068287.1-201ENST00000430283 295 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 KCTD10P1-201ENST00000434203 625 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 USP9YP22-201ENST00000438971 294 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AL590399.6-201ENST00000446396 307 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 RPL29P29-201ENST00000448725 423 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AL162151.2-201ENST00000448875 158 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 PPIAP3-201ENST00000450588 505 ntBASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.58□□□□□ -1.84
VIPAS39Q9H9C1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms